RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 ATP5SQ99766 215 aa18.85■□□□□ 0.61
PTPRM-211ENST00000580170 GLI3P10071 1580 aa18.85■□□□□ 0.61
PTPRM-211ENST00000580170 SP1P08047 785 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 DLK1P80370 383 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 OIT3Q8WWZ8 545 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 ANXA10Q9UJ72 324 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 OR5AU1Q8NGC0 362 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 NEURL1O76050 574 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 IGHV3-13P01766 116 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 IGHV3-7P01780 117 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 TNFAIP6P98066 277 aaPredicted RBP18.84■□□□□ 0.61
PTPRM-211ENST00000580170 HLA-DRB5Q30154 266 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 GPR27Q9NS67 375 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 TRDCB7Z8K6 153 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 PSG6Q00889 435 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 ANAPC16Q96DE5 110 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 GAL3ST2Q9H3Q3 398 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 A0A1W2PQD3 144 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 MT-CO3P00414 261 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 HPXP02790 462 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 NXPH1P58417 271 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 ZDHHC16Q969W1 377 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 VSTM2LQ96N03 204 aa18.84■□□□□ 0.61
PTPRM-211ENST00000580170 OR5B21A6NL26 309 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 FAM87AP0C7U9 286 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 PTP4A1Q93096 173 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 IL36GQ9NZH8 169 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 B4DEV8 164 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 ZNF253O75346 499 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 BCL3P20749 454 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 GABRG3Q99928 467 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 SH2D2AQ9NP31 389 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 AMDHD2Q9Y303 409 aa18.83■□□□□ 0.61
PTPRM-211ENST00000580170 MBPP02686 304 aaPredicted RBP18.83■□□□□ 0.6
PTPRM-211ENST00000580170 SURF2Q15527 256 aaPredicted RBP18.83■□□□□ 0.6
PTPRM-211ENST00000580170 TRBV5-3A0A0A0MS03 114 aa18.83■□□□□ 0.6
PTPRM-211ENST00000580170 A6NDN8 102 aa18.83■□□□□ 0.6
PTPRM-211ENST00000580170 LIPT2A6NK58 231 aa18.83■□□□□ 0.6
PTPRM-211ENST00000580170 IRF3Q14653 427 aa18.83■□□□□ 0.6
PTPRM-211ENST00000580170 CARFQ8N187 725 aa18.83■□□□□ 0.6
PTPRM-211ENST00000580170 PITPNC1Q9UKF7 332 aa18.83■□□□□ 0.6
PTPRM-211ENST00000580170 C3orf80F5H4A9 247 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 CRHP06850 196 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 SPINK2P20155 84 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 DHRS13Q6UX07 377 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 NUFIP2Q7Z417 695 aaKnown RBP18.82■□□□□ 0.6
PTPRM-211ENST00000580170 TGIF2LXQ8IUE1 241 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 C10orf111Q8N326 155 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 CCL17Q92583 94 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 RAB33BQ9H082 229 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 PAM16Q9Y3D7 125 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 C5orf52A6NGY3 159 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 COL5A1-AS1Q5SY13 56 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 SLC26A1Q9H2B4 701 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 OR2M5A3KFT3 312 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 KLF3P57682 345 aaPredicted RBP18.82■□□□□ 0.6
PTPRM-211ENST00000580170 SLC52A3Q9NQ40 469 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 SIRT7Q9NRC8 400 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 FUT9Q9Y231 359 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 MPC1Q9Y5U8 109 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 KLK10O43240 276 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 CD99P14209 185 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 KLF9Q13886 244 aaPredicted RBP18.82■□□□□ 0.6
PTPRM-211ENST00000580170 SLC25A30Q5SVS4 291 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 SLC25A42Q86VD7 318 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 TMEM251Q8N6I4 163 aa18.82■□□□□ 0.6
PTPRM-211ENST00000580170 A0A1W2PN81 502 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 SEMA7AO75326 666 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 SUCLG1P53597 346 aaKnown RBP18.81■□□□□ 0.6
PTPRM-211ENST00000580170 MANBALQ9NQG1 85 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 EIF3IQ13347 325 aaKnown RBP18.81■□□□□ 0.6
PTPRM-211ENST00000580170 GOSR1O95249 250 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 HLA-GP17693 338 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 SPINK14Q6IE38 97 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 PRSS50Q9UI38 385 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 PAPPA2Q9BXP8 1791 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 CAMPP49913 170 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 HRKO00198 91 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 POU2F2P09086 479 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 PSMB2P49721 201 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 HIST3H3Q16695 136 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 HFEQ30201 348 aa18.81■□□□□ 0.6
PTPRM-211ENST00000580170 WDR74Q6RFH5 385 aaPredicted RBP18.81■□□□□ 0.6
PTPRM-211ENST00000580170 MBD1Q9UIS9 605 aaPredicted RBP18.81■□□□□ 0.6
PTPRM-211ENST00000580170 hADV38S2A0JD32 116 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 EPHA8P29322 1005 aaPredicted RBP18.8■□□□□ 0.6
PTPRM-211ENST00000580170 YBX2Q9Y2T7 364 aaKnown RBP18.8■□□□□ 0.6
PTPRM-211ENST00000580170 K7EQS6 105 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 CHST1O43916 411 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 ANKRD34CP0C6C1 535 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 RHBDD2Q6NTF9 364 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 ADAD2Q8NCV1 583 aaKnown RBP18.8■□□□□ 0.6
PTPRM-211ENST00000580170 RAB24Q969Q5 203 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 HSD17B10Q99714 261 aaKnown RBP18.8■□□□□ 0.6
PTPRM-211ENST00000580170 SEBOXQ9HB31 216 aaPredicted RBP18.8■□□□□ 0.6
PTPRM-211ENST00000580170 PLA2G10O15496 165 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 NHSL1Q5SYE7 1610 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 COL18A1P39060 1754 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 SYNGR2O43760 224 aa18.8■□□□□ 0.6
PTPRM-211ENST00000580170 ORM2P19652 201 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms