RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 RAB40AQ8WXH6 277 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 RAB39BQ96DA2 213 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM234AQ9H0X4 552 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 SPACA1Q9HBV2 294 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 A3GALT2U3KPV4 340 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 NOTCH2Q04721 2471 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 DSCAML1Q8TD84 2053 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 H3BUI4 141 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 HSPB6O14558 160 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 NDUFB3O43676 98 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 PDCD6O75340 191 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 APOA1P02647 267 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 FUT3P21217 361 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 CHATP28329 748 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 IL2RGP31785 369 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 OR3A1P47881 315 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 LRRC10Q5BKY1 277 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 RAB12Q6IQ22 244 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 OR8H2Q8N162 312 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 FGFRL1Q8N441 504 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 TMEM185AQ8NFB2 350 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 OR4S1Q8NGB4 309 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 OR10R2Q8NGX6 335 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 PPP1R35Q8TAP8 253 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 DPCDQ9BVM2 203 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 C6orf62Q9GZU0 229 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 CHST6Q9GZX3 395 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 PPA2Q9H2U2 334 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 MIXL1Q9H2W2 232 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 MMP27Q9H306 513 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 SLC25A10Q9UBX3 287 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 PEX16Q9Y5Y5 336 aa13.21□□□□□ -0.29
CSNK1D-212ENST00000580061 A0A0A6YYH2 397 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 A6NJ64 397 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 RGS5O15539 181 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 SCGNO76038 276 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 CSN2P05814 226 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 GLAP06280 429 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 HEXAP06865 529 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 ELK1P19419 428 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 NPY4RP50391 375 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 GNB2P62879 340 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 GRK1Q15835 563 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 PAN3Q58A45 887 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 PLAC9Q5JTB6 97 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 NKAPLQ5M9Q1 402 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 WDR25Q64LD2 544 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 BRICD5Q6PL45 260 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 Q6ZTK2 550 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 C6orf201Q7Z4U5 140 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 RTN4RL2Q86UN3 420 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 BPIFB2Q8N4F0 458 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 OR5D13Q8NGL4 314 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 S100A16Q96FQ6 103 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 CYYR1Q96J86 154 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 NEDD4LQ96PU5 975 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 NUDT16L1Q9BRJ7 211 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 CLN8Q9UBY8 286 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 HSF4Q9ULV5 492 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 MYO9AB2RTY4 2548 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 ABCA2Q9BZC7 2435 aa13.2□□□□□ -0.3
CSNK1D-212ENST00000580061 ITPR3Q14573 2671 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 MCRIP1C9JLW8 97 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 MGST3O14880 152 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 GPR37O15354 613 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 RBM39Q14498 530 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 ESCO2Q56NI9 601 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 LAX1Q8IWV1 398 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 PHF21AQ96BD5 680 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 RAB3CQ96E17 227 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 C1orf159Q96HA4 380 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 ARHGAP5-AS1Q96IT6 56 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 SULT4A1Q9BR01 284 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 SSBP3Q9BWW4 388 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 PECRQ9BY49 303 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 DIABLOQ9NR28 239 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 PLEKHJ1Q9NW61 149 aa13.19□□□□□ -0.3
CSNK1D-212ENST00000580061 MALRD1Q5VYJ5 2156 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 ARHGAP32A7KAX9 2087 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 KIAA1324LA8MWY0 1029 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 A8MXK9 166 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 FAM157AC9JC47 383 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 PHF1O43189 567 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 XRCC3O43542 346 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 NDUFB7P17568 137 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 CDK2P24941 298 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 KCNJ3P48549 501 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 ATXN7L3Q14CW9 347 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 GDPD3Q7L5L3 318 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 CIARTQ8N365 385 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 MAPK1IP1LQ8NDC0 245 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 PLPPR1Q8TBJ4 325 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 NEK7Q8TDX7 302 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 FAAP24Q9BTP7 215 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 ADAM30Q9UKF2 790 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 KCNK7Q9Y2U2 307 aa13.18□□□□□ -0.3
CSNK1D-212ENST00000580061 OTOGQ6ZRI0 2925 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms