RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 MALLQ13021 153 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 SHBQ15464 509 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 UBE2V2Q15819 145 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 NKAIN1Q4KMZ8 207 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 KRBOX4Q5JUW0 171 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 FAM27BQ5VT28 67 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 C1orf189Q5VU69 101 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 CARD17Q5XLA6 110 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 TMEM211Q6ICI0 200 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 Q6ZS49 121 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 C6orf201Q7Z4U5 140 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 CPEB2Q7Z5Q1 589 aaKnown RBP4.59□□□□□ -1.67
CDH8-206ENST00000580044 WDR5BQ86VZ2 330 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 PRSS58Q8IYP2 241 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 MAML2Q8IZL2 1156 aaPredicted RBP4.59□□□□□ -1.67
CDH8-206ENST00000580044 OR2C3Q8N628 320 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 FADS6Q8N9I5 356 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 WDSUB1Q8N9V3 476 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 BHLHE23Q8NDY6 225 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 OR4D5Q8NGN0 318 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 OR10G4Q8NGN3 311 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 NANPQ8TBE9 248 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 POC1BQ8TC44 478 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 CD300LFQ8TDQ1 290 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 IL22RA2Q969J5 263 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 MRPL24Q96A35 216 aaKnown RBP4.59□□□□□ -1.67
CDH8-206ENST00000580044 BOD1Q96IK1 185 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 LYZL4Q96KX0 146 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 PIGQQ9BRB3 760 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 SF3B5Q9BWJ5 86 aaKnown RBP4.59□□□□□ -1.67
CDH8-206ENST00000580044 WDR54Q9H977 334 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 NIT2Q9NQR4 276 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 GSN-AS1Q9NRJ2 163 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 SLC2A9Q9NRM0 540 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 ZNF319Q9P2F9 582 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 NXT1Q9UKK6 140 aaKnown RBP4.59□□□□□ -1.67
CDH8-206ENST00000580044 RNF150Q9ULK6 438 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 SLC7A11Q9UPY5 501 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 NOSIPQ9Y314 301 aaKnown RBP4.59□□□□□ -1.67
CDH8-206ENST00000580044 DMRT1Q9Y5R6 373 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 MTCH2Q9Y6C9 303 aa4.59□□□□□ -1.67
CDH8-206ENST00000580044 CACNA1CQ13936 2221 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 TRAV20A0A0B4J274 112 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 LRP5LA4QPB2 252 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 CLEC18AA5D8T8 446 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 RBFOX3A6NFN3 312 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 A6NLC8 198 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 C9JQL5 133 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 F5H5K5 113 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 K7N7A8 449 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 DHHO43323 396 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 XRCC2O43543 280 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 PDCD6O75340 191 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 DFFBO76075 338 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 HSPB1P04792 205 aaKnown RBP4.58□□□□□ -1.68
CDH8-206ENST00000580044 CST2P09228 141 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 CTXN2P0C2S0 81 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 CEACAM1P13688 526 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 TCN2P20062 427 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 CDAP32320 146 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 PTGDSP41222 190 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 CLDN17P56750 224 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 VAMP2P63027 116 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 EWSR1Q01844 656 aaKnown RBP eCLIP4.58□□□□□ -1.68
CDH8-206ENST00000580044 PNRC1Q12796 327 aaPredicted RBP4.58□□□□□ -1.68
CDH8-206ENST00000580044 ENDOGQ14249 297 aaKnown RBP4.58□□□□□ -1.68
CDH8-206ENST00000580044 EXT1Q16394 746 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 ACSF3Q4G176 576 aaPredicted RBP4.58□□□□□ -1.68
CDH8-206ENST00000580044 HIKESHIQ53FT3 197 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 AKIRIN2Q53H80 203 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 LCN10Q6JVE6 187 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 HEPN1Q6WQI6 88 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 SLC35E3Q7Z769 313 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 WDFY1Q8IWB7 410 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 OSR2Q8N2R0 312 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 GPR137CQ8N3F9 429 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 TMEM156Q8N614 296 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 LINC00469Q8N7U9 141 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 CLEC18CQ8NCF0 446 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 SMRP1Q8NCR6 262 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 OR5D18Q8NGL1 313 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 FAM213BQ8TBF2 198 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 TOMM40LQ969M1 308 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 PIGTQ969N2 578 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 ERGIC1Q969X5 290 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 NABP1Q96AH0 204 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 MSI2Q96DH6 328 aaKnown RBP4.58□□□□□ -1.68
CDH8-206ENST00000580044 BORCS8Q96FH0 119 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 TMEM56Q96MV1 263 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 NIPSNAP3BQ9BS92 247 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 PAPOLGQ9BWT3 736 aaKnown RBP4.58□□□□□ -1.68
CDH8-206ENST00000580044 SCRT1Q9BWW7 348 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 DEFB126Q9BYW3 111 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 SMIM3Q9BZL3 60 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 ULBP2Q9BZM5 246 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 TOLLIPQ9H0E2 274 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 CDIP1Q9H305 208 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 PLEKHF2Q9H8W4 249 aa4.58□□□□□ -1.68
CDH8-206ENST00000580044 LYRM2Q9NU23 88 aaPredicted RBP4.58□□□□□ -1.68
CDH8-206ENST00000580044 TMEM242Q9NWH2 141 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms