RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 IL36RNQ9UBH0 155 aa11.03□□□□□ -0.64
GGA3-208ENST00000579743 DHDHQ9UQ10 334 aa11.03□□□□□ -0.64
GGA3-208ENST00000579743 EXOGQ9Y2C4 368 aaKnown RBP11.03□□□□□ -0.64
GGA3-208ENST00000579743 AMMECR1Q9Y4X0 333 aaPredicted RBP11.03□□□□□ -0.64
GGA3-208ENST00000579743 ODAMA1E959 279 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 ZNF729A6NN14 1252 aaPredicted RBP11.02□□□□□ -0.65
GGA3-208ENST00000579743 FAM90A22PA8MWA6 464 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 SULT1B1O43704 296 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 ALX3O95076 343 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 CLIC3O95833 236 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 PF4V1P10720 104 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 BLCAPP62952 87 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 AESQ08117 197 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 ZIK1Q3SY52 487 aaPredicted RBP11.02□□□□□ -0.65
GGA3-208ENST00000579743 FBLN7Q53RD9 439 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 KPRPQ5T749 579 aaPredicted RBP11.02□□□□□ -0.65
GGA3-208ENST00000579743 PRAMEF5Q5TYX0 476 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 TCF23Q7RTU1 214 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 LYG1Q8N1E2 194 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 OR5AU1Q8NGC0 362 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 OR5D18Q8NGL1 313 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 OR4P4Q8NGL7 312 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 OR5AK2Q8NH90 309 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 PELI1Q96FA3 418 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 CITED2Q99967 270 aaPredicted RBP11.02□□□□□ -0.65
GGA3-208ENST00000579743 C9orf16Q9BUW7 83 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 ALG8Q9BVK2 526 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 BARHL1Q9BZE3 327 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 WNT10AQ9GZT5 417 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 MMP28Q9H239 520 aa11.02□□□□□ -0.65
GGA3-208ENST00000579743 DSCAML1Q8TD84 2053 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 OR4C45A6NMZ5 311 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 PIN1P1O15428 100 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 CD2P06729 351 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 FAM106CPP0CH98 169 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 CD33P20138 364 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 RAB3AP20336 220 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 C21orf33P30042 268 aaPredicted RBP11.01□□□□□ -0.65
GGA3-208ENST00000579743 GLIPR1P48060 266 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 MTNR1BP49286 362 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 NANOS3P60323 173 aaKnown RBP11.01□□□□□ -0.65
GGA3-208ENST00000579743 RAB40BQ12829 278 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 RBM39Q14498 530 aaKnown RBP11.01□□□□□ -0.65
GGA3-208ENST00000579743 KISS1Q15726 138 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 KLHL22Q53GT1 634 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 CCDC121Q6ZUS5 278 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 LHFPL3Q86UP9 236 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 SPACA5Q96QH8 159 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 SLC25A33Q9BSK2 321 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 ING3Q9NXR8 418 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 MYRFQ9Y2G1 1151 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 RPL36Q9Y3U8 105 aaKnown RBP11.01□□□□□ -0.65
GGA3-208ENST00000579743 VWFP04275 2813 aa11.01□□□□□ -0.65
GGA3-208ENST00000579743 TCRBV4S1A1TA0A5B7 111 aa11□□□□□ -0.65
GGA3-208ENST00000579743 J3QRE1 110 aa11□□□□□ -0.65
GGA3-208ENST00000579743 OR2F2O95006 317 aa11□□□□□ -0.65
GGA3-208ENST00000579743 PF4P02776 101 aa11□□□□□ -0.65
GGA3-208ENST00000579743 NFYBP25208 207 aa11□□□□□ -0.65
GGA3-208ENST00000579743 CD34P28906 385 aa11□□□□□ -0.65
GGA3-208ENST00000579743 RSU1Q15404 277 aa11□□□□□ -0.65
GGA3-208ENST00000579743 HLA-DRB5Q30154 266 aa11□□□□□ -0.65
GGA3-208ENST00000579743 PAN3Q58A45 887 aaKnown RBP11□□□□□ -0.65
GGA3-208ENST00000579743 LDLRAD2Q5SZI1 272 aa11□□□□□ -0.65
GGA3-208ENST00000579743 ZNF691Q5VV52 312 aa11□□□□□ -0.65
GGA3-208ENST00000579743 CBR4Q8N4T8 237 aa11□□□□□ -0.65
GGA3-208ENST00000579743 PARP16Q8N5Y8 322 aa11□□□□□ -0.65
GGA3-208ENST00000579743 OR51A4Q8NGJ6 313 aa11□□□□□ -0.65
GGA3-208ENST00000579743 OR9G1Q8NH87 305 aa11□□□□□ -0.65
GGA3-208ENST00000579743 RPEQ96AT9 228 aa11□□□□□ -0.65
GGA3-208ENST00000579743 LGALS12Q96DT0 336 aa11□□□□□ -0.65
GGA3-208ENST00000579743 NR1H4Q96RI1 486 aaPredicted RBP11□□□□□ -0.65
GGA3-208ENST00000579743 S100A13Q99584 98 aa11□□□□□ -0.65
GGA3-208ENST00000579743 NECAP2Q9NVZ3 263 aa11□□□□□ -0.65
GGA3-208ENST00000579743 TSSC4Q9Y5U2 329 aaPredicted RBP11□□□□□ -0.65
GGA3-208ENST00000579743 PLXNB1O43157 2135 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 MEIKINA0A087WXM9 373 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 IGKV1-12A0A0C4DH73 117 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 KBTBD11-OT1A0A1B0GTJ5 212 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 A0A1W2PRX2 142 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 H0YJX3 145 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 BUB1B-PAK6H3BSN5 160 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 SLC33A1O00400 549 aaPredicted RBP10.99□□□□□ -0.65
GGA3-208ENST00000579743 MMP23AO75900 390 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 IGKV1D-12P01611 117 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 OR3A4PP47883 348 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 KCNJ3P48549 501 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 ATXN7L3Q14CW9 347 aaPredicted RBP10.99□□□□□ -0.65
GGA3-208ENST00000579743 ABCA11PQ4W5N1 156 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 TPTE2P1Q5T6R2 138 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 SATL1Q86VE3 508 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 PXT1Q8NFP0 134 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 OR10AC1Q8NH08 325 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 MRAPQ8TCY5 172 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 TOMM40LQ969M1 308 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
GGA3-208ENST00000579743 RBM14Q96PK6 669 aaKnown RBP10.99□□□□□ -0.65
GGA3-208ENST00000579743 OCSTAMPQ9BR26 566 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 NCOR1P1Q9H4R4 102 aa10.99□□□□□ -0.65
GGA3-208ENST00000579743 PAK1IP1Q9NWT1 392 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms