RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 HAGHLQ6PII5 290 aaPredicted RBP8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 P4HA3Q7Z4N8 544 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LYZL2Q7Z4W2 148 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 PIP4P1Q86T03 277 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 MDP1Q86V88 176 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZNF565Q8N9K5 539 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 OR5T2Q8NGG2 359 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 OR11L1Q8NGX0 322 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 NEK7Q8TDX7 302 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 GLYATL2Q8WU03 294 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 GTF3AQ92664 365 aaKnown RBP8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LRRC46Q96FV0 321 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 GMPPAQ96IJ6 420 aaPredicted RBP8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZDHHC11Q9H8X9 412 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TAF9BQ9HBM6 251 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LPAR3Q9UBY5 353 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZNF629Q9UEG4 869 aaPredicted RBP8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TMED3Q9Y3Q3 217 aa8□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZNF705EA8MWA4 302 aaPredicted RBP7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 J3QT63 122 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 GPR31O00270 319 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 MPPED1O15442 326 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TUSC2O75896 110 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 JTBO76095 146 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TK1P04183 234 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 RCC1P18754 421 aaPredicted RBP7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 P2RY1P47900 373 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 KCNJ3P48549 501 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 DEFA5Q01523 94 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TBC1D28Q2M2D7 210 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 PXDC1Q5TGL8 231 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 GPR157Q5UAW9 335 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZNF880Q6PDB4 577 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ATRAIDQ6UW56 229 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 FBXW12Q6X9E4 464 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LDLRAD3Q86YD5 345 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 FAM58AQ8N1B3 248 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 BOLLQ8N9W6 283 aaKnown RBP7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SUMF2Q8NBJ7 301 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 OR4D5Q8NGN0 318 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LHFPL5Q8TAF8 219 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 MRPL30Q8TCC3 161 aaKnown RBP7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 NARS2Q96I59 477 aaKnown RBP7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SMIM8Q96KF7 97 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TP53RKQ96S44 253 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SPIN2AQ99865 258 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SPIN2BQ9BPZ2 258 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ARV1Q9H2C2 271 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 IFT22Q9H7X7 185 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 RHOFQ9HBH0 211 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 CDH20Q9HBT6 801 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 GLRX2Q9NS18 164 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 IL36RNQ9UBH0 155 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LHX6Q9UPM6 363 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 RCL1Q9Y2P8 373 aaKnown RBP7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 POMT1Q9Y6A1 747 aa7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TNRC18O15417 2968 aaPredicted RBP7.99□□□□□ -1.13
CDK5RAP3-208ENST00000578525 BORCS7-ASMTA0A0B4J1R7 106 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 DUXBA0A1W2PPF3 345 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 DNASE2O00115 360 aaPredicted RBP7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TSPAN4O14817 238 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ST8SIA3O43173 380 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 MED6O75586 246 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SLC34A2O95436 690 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 CDS2O95674 445 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 IGHG3P01860 377 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SCTP09683 121 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 IL32P24001 234 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TMEM33P57088 247 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 HLA-DRB3P79483 266 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TSC22D1Q15714 1073 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 OR2T2Q6IF00 324 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 MEX3BQ6ZN04 569 aaKnown RBP7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TBC1D26Q86UD7 250 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SLC35G3Q8N808 338 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 UBAC2Q8NBM4 344 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 OR4A4PQ8NGN8 299 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SECTM1Q8WVN6 248 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ABHD14BQ96IU4 210 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TMEM56Q96MV1 263 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 CABLES2Q9BTV7 478 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 RTL8AQ9BWD3 113 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SMIM3Q9BZL3 60 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 NKX6-2Q9C056 277 aaPredicted RBP7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TMEM222Q9H0R3 208 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 OR51I2Q9H344 312 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 PARP11Q9NR21 331 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 CLCF1Q9UBD9 225 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZDHHC8Q9ULC8 765 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 CARHSP1Q9Y2V2 147 aaKnown RBP7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 UBE2J1Q9Y385 318 aaPredicted RBP7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ATP23Q9Y6H3 246 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TMEM56-RWDD3S4R434 201 aa7.98□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ARHGAP21Q5T5U3 1957 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LRP5LA4QPB2 252 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 CDRT15L2A8MXV6 281 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ABCD4O14678 606 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SIGLEC5O15389 551 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 GALR2O43603 387 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms