RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 LDLRAD2Q5SZI1 272 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 FAHD1Q6P587 224 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 UNQ9370/PRO34162Q6UXP9 181 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 LHFPL2Q6ZUX7 228 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 EMG1Q92979 244 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 SPSB1Q96BD6 273 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 BORCS8Q96FH0 119 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 ADI1Q9BV57 179 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 MTCH1Q9NZJ7 389 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 TGP01266 2768 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 CRYZL1O95825 349 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 IGLV1-47P01700 117 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 EFNB1P98172 346 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 MS4A2Q01362 244 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 GRK1Q15835 563 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 OR10A7Q8NGE5 316 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 CHPT1Q8WUD6 406 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 FAM192AQ9GZU8 254 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 COMMD4Q9H0A8 199 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 ADGRL4Q9HBW9 690 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 TVP23BQ9NYZ1 205 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 MOB4Q9Y3A3 225 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 CBY1Q9Y3M2 126 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 HSPE1-MOB4S4R3N1 261 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 ANKRD34BA5PLL1 514 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A18PA6NE21 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A16PA6NEW6 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A20PA6NIJ5 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 ZNF729A6NN14 1252 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A9PA6NNJ1 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A12PA8MX19 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A5PA8MXJ8 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FGF16O43320 207 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 SYT7O43581 403 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 OR2T7P0C7T2 308 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A15PP0C7V4 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A13PP0C7W8 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A14PP0C7W9 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM90A24PP0C7X0 464 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 RBP2P50120 134 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 KPNB1Q14974 876 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 TPTE2P1Q5T6R2 138 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM58AQ8N1B3 248 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 ABHD12Q8N2K0 398 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 TMEM163Q8TC26 289 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 MRM2Q9UI43 246 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 DNAH3Q8TD57 4116 aa8.96□□□□□ -0.98
SMARCE1-214ENST00000578112 METTL15A6NJ78 407 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 PRR32B1ATL7 298 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 SH2D1BO14796 132 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 MT-ND2P03891 347 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM106CPP0CH98 169 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 PIPP12273 146 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 RAB13P51153 203 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 CXCR4P61073 352 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 PAX5Q02548 391 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 HLA-DRB5Q30154 266 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 PLA1AQ53H76 456 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 TCTEX1D4Q5JR98 221 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 C12orf73Q69YU5 71 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 PLEKHG7Q6ZR37 379 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 TMEM179BQ7Z7N9 219 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 SLC38A6Q8IZM9 456 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 EXOSC4Q9NPD3 245 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 INPP5EQ9NRR6 644 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 HILPDAQ9Y5L2 63 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 LY6LH3BQJ8 138 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 ENTPD6O75354 484 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 RPL23AP62750 156 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 CD69Q07108 199 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 TMEM244Q5VVB8 128 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 KCTD20Q7Z5Y7 419 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 STMN2Q93045 179 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 OR6C3Q9NZP0 311 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 ZNF580Q9UK33 172 aa8.95□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM230AA0A1W2PPH8 454 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 PSMB11A5LHX3 300 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 TOR1AO14656 332 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 KDM4BO94953 1096 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 ISG15P05161 165 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 S100A9P06702 114 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 MRPL3P09001 348 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 DBTP11182 482 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 PTGFRP43088 359 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 OR3A1P47881 315 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 RAB7AP51149 207 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 HCCSP53701 268 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 SLC35B1P78383 322 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 DGCR2P98153 550 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 UBE2V2Q15819 145 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 FDX2Q6P4F2 183 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 CDH26Q8IXH8 852 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 OR4D6Q8NGJ1 314 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 CANT1Q8WVQ1 401 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 SLAMF9Q96A28 289 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 APOL4Q9BPW4 351 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 GON7Q9BXV9 100 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 CADM1Q9BY67 442 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 GABARAPL1Q9H0R8 117 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 LINC00574Q9H8X3 128 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms