RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 VGLL3A8MV65 326 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 LYRM1O43325 122 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 TCF21O43680 179 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 LILRA1O75019 489 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 SULT1A3P0DMM9 295 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 SULT1A4P0DMN0 295 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 SHC1P29353 583 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 LPAR6P43657 344 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 CNN1P51911 297 aaKnown RBP2.56□□□□□ -2
SMCHD1-203ENST00000577880 FOXL2P58012 376 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 TPPP2P59282 170 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 SNRPD3P62318 126 aaKnown RBP2.56□□□□□ -2
SMCHD1-203ENST00000577880 PSG6Q00889 435 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 EIF4EBP2Q13542 120 aaPredicted RBP2.56□□□□□ -2
SMCHD1-203ENST00000577880 PNLIPRP3Q17RR3 467 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 C1QTNF12Q5T7M4 302 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 VWA1Q6PCB0 445 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 Q71RC1 249 aaPredicted RBP2.56□□□□□ -2
SMCHD1-203ENST00000577880 ZNF767PQ75MW2 155 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 BHLHA9Q7RTU4 235 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 MMD2Q8IY49 270 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 CLEC18CQ8NCF0 446 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 STXBP6Q8NFX7 210 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 OR4B1Q8NGF8 309 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 OR4A5Q8NH83 315 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 ASB10Q8WXI3 467 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 TMEM158Q8WZ71 300 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 WDR61Q9GZS3 305 aaKnown RBP2.56□□□□□ -2
SMCHD1-203ENST00000577880 POFUT1Q9H488 388 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 NTN4Q9HB63 628 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 TMEM165Q9HC07 324 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 ZNF331Q9NQX6 463 aaPredicted RBP2.56□□□□□ -2
SMCHD1-203ENST00000577880 PRNDQ9UKY0 176 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 OTOGLQ3ZCN5 2332 aa2.56□□□□□ -2
SMCHD1-203ENST00000577880 ZNFX1Q9P2E3 1918 aaKnown RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 TRAV20A0A0B4J274 112 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 C20orf202A1L168 122 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 POM121CA8CG34 1229 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 SNRPGP15A8MWD9 76 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 NTN3O00634 580 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 EREGO14944 169 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 UPK3AO75631 287 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 NTN1O95631 604 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 OR13C7P0DN81 318 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 GLI4P10075 376 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 MUC1P15941 1255 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 CTRB1P17538 263 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 COX5AP20674 150 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 MEOX2P50222 304 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 MMP15P51511 669 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 CD226Q15762 336 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 CMPK2Q5EBM0 449 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 FAM209BQ5JX69 171 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 FAM27BQ5VT28 67 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ZNF385CQ66K41 422 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 CTRB2Q6GPI1 263 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 OR4A47Q6IF82 309 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 APOOLQ6UXV4 268 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ZNF546Q86UE3 836 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 FAM219AQ8IW50 185 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 AMER3Q8N944 861 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 OR5B3Q8NH48 314 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 DVL3Q92997 716 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 IL22RA2Q969J5 263 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ZNF385AQ96PM9 386 aaKnown RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 NPAS1Q99742 590 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ARHGDIGQ99819 225 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 DPCDQ9BVM2 203 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 PLA2G12AQ9BZM1 189 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ACTR3CQ9C0K3 210 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 MFFQ9GZY8 342 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ZNF703Q9H7S9 590 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 FAM212BQ9NTI7 297 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 PSENENQ9NZ42 101 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 DPM3Q9P2X0 92 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TMED3Q9Y3Q3 217 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 HSPB11Q9Y547 144 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 SIRT4Q9Y6E7 314 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 KCNE3Q9Y6H6 103 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 CUL9Q8IWT3 2517 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 MED19A0JLT2 244 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 J3QW42 95 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 NDUFS8O00217 210 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RAB29O14966 203 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TO15178 435 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ADAP1O75689 374 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TRGV3P03979 118 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 HLA-GP17693 338 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TIMP3P35625 211 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 MPV17P39210 176 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 CD200P41217 278 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 COMPP49747 757 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 MVDP53602 400 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 GP2P55259 537 aaKnown RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 ZP4Q12836 540 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 OR2F1Q13607 317 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 PEA15Q15121 130 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TBCEQ15813 527 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 MPV17LQ2QL34 196 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TMEM30BQ3MIR4 351 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms