RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 BEX2Q9BXY8 128 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 CHST6Q9GZX3 395 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 SIRPDQ9H106 197 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 DNTTIP1Q9H147 329 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 KCNK15Q9H427 330 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 NEK6Q9HC98 313 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 TMEM138Q9NPI0 162 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 SLC25A10Q9UBX3 287 aaPredicted RBP7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 CDC42EP3Q9UKI2 254 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 BLOC1S6Q9UL45 172 aa7.78□□□□□ -1.16
NPLOC4-219ENST00000576713 TENM1Q9UKZ4 2725 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 NKX6-3A6NJ46 265 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 J3QLI3 93 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 SIRPB1O00241 398 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 NDUFB3O43676 98 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 HAND1O96004 215 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 TK1P04183 234 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 OCMP0CE72 109 aaPredicted RBP7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 FAM157CP0CG43 387 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 NDUFB7P17568 137 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 CPT2P23786 658 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 ZNF93P35789 620 aaPredicted RBP7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 PTGFRP43088 359 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 OR3A1P47881 315 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 NPY4RP50391 375 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 ARF6P62330 175 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 GPR50Q13585 617 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 ZNF273Q14593 569 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 ZNF146Q15072 292 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 KCTD21Q4G0X4 260 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 RTN4RL2Q86UN3 420 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 SAXO1Q8IYX7 474 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 BCL6BQ8N143 479 aaPredicted RBP7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 TPRX1Q8N7U7 411 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 Q8NFD4 153 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 OR4S1Q8NGB4 309 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 C8orf46Q8TAG6 207 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 H1FXQ92522 213 aaKnown RBP7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 MUL1Q969V5 352 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 MED30Q96HR3 178 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 YTHDF1Q9BYJ9 559 aaKnown RBP7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 FAM192AQ9GZU8 254 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 NDUFB11Q9NX14 153 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 FOXJ3Q9UPW0 622 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 GSTK1Q9Y2Q3 226 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 AUP1Q9Y679 476 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 ATRQ13535 2644 aa7.77□□□□□ -1.17
NPLOC4-219ENST00000576713 K7N7A8 449 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 ENSAO43768 121 aaKnown RBP7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 OR2H2O95918 312 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 PPIAL4GP0DN37 164 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 CD37P11049 281 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 CCL3L1P16619 93 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 SRD5A1P18405 259 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 GATA3P23771 443 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 CAV3P56539 151 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 PPP3R1P63098 170 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 LRRC10Q5BKY1 277 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 RUSC1-AS1Q66K80 236 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 TMEM200BQ69YZ2 307 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 ELP2Q6IA86 826 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 CD200R1LQ6Q8B3 271 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 NR2C2APQ86WQ0 139 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 ZNF561Q8N587 486 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 C11orf42Q8N5U0 333 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 MS4A15Q8N5U1 240 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 ASCC1Q8N9N2 400 aaKnown RBP7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 ZSCAN4Q8NAM6 433 aaPredicted RBP7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 TMEM104Q8NE00 496 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 PXT1Q8NFP0 134 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 UPRTQ96BW1 309 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 WDFY2Q96P53 400 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 NR1H4Q96RI1 486 aaPredicted RBP7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 GPER1Q99527 375 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 PCGF1Q9BSM1 259 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 ZNF69Q9UC07 566 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 ING4Q9UNL4 249 aa7.76□□□□□ -1.17
NPLOC4-219ENST00000576713 TRAV24A0A0B4J272 114 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 TRAV40A0A0B4J280 105 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 A0A0G2JK05 382 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 MDFIC2A0A1B0GVS7 189 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 SLC33A1O00400 549 aaPredicted RBP7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 HSPB6O14558 160 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 MRPS14O60783 128 aaKnown RBP7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 CHRM2P08172 466 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 SMIM18P0DKX4 95 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 SRMP19623 302 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 PSMB9P28065 219 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 GABRA5P31644 462 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 CAPZA1P52907 286 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 DLX6P56179 175 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 PLA2G7Q13093 441 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 KLRD1Q13241 179 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 NEDD8Q15843 81 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 HSD17B12Q53GQ0 312 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 UTF1Q5T230 341 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 OR10K2Q6IF99 312 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 HCP5Q6MZN7 132 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 GLIPR1L1Q6UWM5 242 aa7.75□□□□□ -1.17
NPLOC4-219ENST00000576713 BRD3OSQ6XYD6 125 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms