RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 GLIPR1P48060 266 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 LUMP51884 338 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 CRISP1P54107 249 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 TEX38Q6PEX7 206 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 CATSPERDQ86XM0 798 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 ADGRG5Q8IZF4 528 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 HS3ST5Q8IZT8 346 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 Q8NFD4 153 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR8U1Q8NH10 309 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 MUC7Q8TAX7 377 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 CCDC124Q96CT7 223 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 RAX2Q96IS3 184 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 HRASLS5Q96KN8 279 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 DUX3Q96PT4 197 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 PRR25Q96S07 402 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 GON7Q9BXV9 100 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 HMG20AQ9NP66 347 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 KRT84Q9NSB2 600 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR6C3Q9NZP0 311 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 IGHG2P01859 326 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 OCM2P0CE71 109 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 OCMP0CE72 109 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 UBCP0CG48 685 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 CALCBP10092 127 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 ZNF44P15621 663 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 PRKACBP22694 351 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 NFYBP25208 207 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 ECI1P42126 302 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 BNIP1Q12981 228 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 MADCAM1Q13477 382 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 PTGES3Q15185 160 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 KIAA2026Q5HYC2 2103 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 KRBOX4Q5JUW0 171 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 CASC10Q5T4H9 136 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 NXNL2Q5VZ03 156 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 LHFPL2Q6ZUX7 228 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 GID4Q8IVV7 300 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 STPG2Q8N412 459 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 DRAM1Q8N682 238 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 CHST4Q8NCG5 386 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 CANT1Q8WVQ1 401 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 SPSB1Q96BD6 273 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 ASCL2Q99929 193 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 LINC00527Q9UJ94 153 aa9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 SIRT4Q9Y6E7 314 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-212ENST00000576613 LOC107986453A0A1B0GWG9 222 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 METTL15A6NJ78 407 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 AQP12BA6NM10 295 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 SEC14L6B5MCN3 397 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 AP4M1O00189 453 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM107AO95990 144 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 CHATP28329 748 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 RAB7AP51149 207 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 SCN1BQ07699 218 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 PDZK1IP1Q13113 114 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 DOC2BQ14184 412 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 CXorf66Q5JRM2 361 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 BCDIN3DQ7Z5W3 292 aaKnown RBP9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 AQP12AQ8IXF9 295 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR8H3Q8N146 312 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 TMEM163Q8TC26 289 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 KIRREL1Q96J84 757 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 TBX5Q99593 518 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 COMMD4Q9H0A8 199 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 DCLRE1BQ9H816 532 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 RHOFQ9HBH0 211 aa9.17□□□□□ -0.94
CTDNEP1-212ENST00000576613 KBTBD11-OT1A0A1B0GTJ5 212 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 J3QR06 171 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 SULT1C4O75897 302 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR2T7P0C7T2 308 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 ZNF20P17024 532 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 HNF4GQ14541 408 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 KIR2DS1Q14954 304 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 ATXN7L3Q14CW9 347 aaPredicted RBP9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 PNLIPRP3Q17RR3 467 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 C17orf58Q2M2W7 97 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 DEFB136Q30KP8 78 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 AADACL4Q5VUY2 407 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 UTS2BQ765I0 119 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 SSX6Q7RTT6 188 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM220AQ7Z4H9 259 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 TCEANCQ8N8B7 351 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 ZNF565Q8N9K5 539 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 HAVCR2Q8TDQ0 301 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 COQ2Q96H96 371 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 OPALINQ96PE5 141 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 ING3Q9NXR8 418 aa9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 ZNF256Q9Y2P7 627 aaPredicted RBP9.16□□□□□ -0.94
CTDNEP1-212ENST00000576613 IGKV1-9A0A0C4DH69 117 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 A0A1W2PQL4 384 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 M0R129 80 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 KDM4BO94953 1096 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 RPLP1P05386 114 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 ATF1P18846 271 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 C21orf33P30042 268 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 GLP1RP43220 463 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 CDX1P47902 265 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms