RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TIMM8AO60220 97 aaPredicted RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 ISG15P05161 165 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 CRISP2P16562 243 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 MESP2Q0VG99 397 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 LY6G6FQ5SQ64 297 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 MSL2Q9HCI7 577 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 TMEM9BQ9NQ34 198 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 TGIF2-C20orf24A0A0A6YYL0 155 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 J3QRE1 110 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 AQP7O14520 342 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 CYB5R3P00387 301 aaPredicted RBP11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 FHITP49789 147 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 TCTEX1D1Q8N7M0 179 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR10G3Q8NGC4 313 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 CORO2AQ92828 525 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 PILRAQ9UKJ1 303 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 NYNRINQ9P2P1 1898 aaKnown RBP11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 SCN2AQ99250 2005 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 PITX3O75364 302 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 IL2RAP01589 272 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 PGA4P0DJD7 388 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 PGA5P0DJD9 388 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 EDDM3BP56851 147 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 GAPTQ8N292 157 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 TMEM252Q8N6L7 170 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 MYOFQ9NZM1 2061 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF638Q14966 1978 aaKnown RBP11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 IGLV1-36A0A0B4J1U3 117 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 MMP9P14780 707 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 CDC34P49427 236 aaPredicted RBP11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 TAS2R45P59539 299 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 FHL5Q5TD97 284 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 ETV3LQ6ZN32 361 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 H1FOOQ8IZA3 346 aaPredicted RBP11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 POC1AQ8NBT0 407 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 RARRES2Q99969 163 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 THSD7AQ9UPZ6 1657 aa11.53□□□□□ -0.56
PCDHGB3-201ENST00000576222 MOSPD3O75425 235 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 CELA2BP08218 269 aaPredicted RBP11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 BCL2P10415 239 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF32P17041 273 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 HLA-GP17693 338 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 FOXO1Q12778 655 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 CNEP1R1Q8N9A8 125 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 PTPMT1Q8WUK0 201 aaPredicted RBP11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 PCOLCE2Q9UKZ9 415 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 AQP7P3A6NL99 342 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF708P17019 499 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 GALNSP34059 522 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 AMTP48728 403 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 RND3P61587 244 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 LSM6P62312 80 aaKnown RBP11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 SCGB2A2Q13296 93 aa11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 KDF1Q8NAX2 398 aaPredicted RBP11.52□□□□□ -0.56
PCDHGB3-201ENST00000576222 OTOFQ9HC10 1997 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 ANKRD36A6QL64 1941 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 A0A1B0GTI1 187 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 FOXK1P85037 733 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR5I1Q13606 314 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 GAMTQ14353 236 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 ZNF468Q5VIY5 522 aaPredicted RBP11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 ETFRF1Q6IPR1 90 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 DPPA3Q6W0C5 159 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR2I1PQ8NGU4 316 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 ABHD5Q8WTS1 349 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 AUP1Q9Y679 476 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 MTCH2Q9Y6C9 303 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 IGKV1D-42A0A075B6H8 117 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 SPINK4O60575 86 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 TBX6O95947 436 aaPredicted RBP11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 BMP5P22003 454 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 GPR12P47775 334 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 UBE2G1P62253 170 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 SRSF3P84103 164 aaKnown RBP11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 TBC1D28Q2M2D7 210 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 TMEM240Q5SV17 173 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR10V1Q8NGI7 309 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 C10orf35Q96D05 121 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 MANBALQ9NQG1 85 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 KNTC1P50748 2209 aa11.52□□□□□ -0.57
PCDHGB3-201ENST00000576222 TOX4O94842 621 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 TRGC1P0CF51 173 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 MDH2P40926 338 aaKnown RBP11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 PDCD11Q14690 1871 aaKnown RBP11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 FAM162BQ5T6X4 162 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 CHST5Q9GZS9 411 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 GOLT1BQ9Y3E0 138 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 LCTP09848 1927 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 FOXS1O43638 330 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 GCGP01275 180 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 CYB561P49447 251 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 ATP6V1FQ16864 119 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 SMIM8Q96KF7 97 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 TMEM147Q9BVK8 224 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 GPR27Q9NS67 375 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 ANK1P16157 1881 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms