RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 OR10J3Q5JRS4 329 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 NPSR1Q6W5P4 371 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 Q6ZVH6 145 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 OAFQ86UD1 273 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 P2RY8Q86VZ1 359 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 RAB43Q86YS6 212 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 PNKDQ8N490 385 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 DOK4Q8TEW6 326 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 LRRC29Q8WV35 223 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 FAM3DQ96BQ1 224 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 C20orf144Q9BQM9 153 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 RSG1Q9BU20 258 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 FBXL3Q9UKT7 428 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 FLVCR1Q9Y5Y0 555 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 SLC25A15Q9Y619 301 aa4.34□□□□□ -1.71
VPS53-219ENST00000576019 DOCK10Q96BY6 2186 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 IGLV1-36A0A0B4J1U3 117 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 FAM92AA1XBS5 289 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 GATCO43716 136 aaKnown RBP4.33□□□□□ -1.72
VPS53-219ENST00000576019 PSMG1O95456 288 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 CSF3P09919 207 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 OR5H8P0DN80 308 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 CD70P32970 193 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 PPICP45877 212 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 OR10A3P58181 314 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 DSTNP60981 165 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 RPS21P63220 83 aaKnown RBP4.33□□□□□ -1.72
VPS53-219ENST00000576019 HMGCS1Q01581 520 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 KIAA0087Q14695 138 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 THEM4Q5T1C6 240 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 C2orf66Q6UXQ4 117 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 SLC30A8Q8IWU4 369 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 KLHDC8BQ8IXV7 354 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 TMEM156Q8N614 296 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 OR4K2Q8NGD2 314 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 OR10W1Q8NGF6 305 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 OR6Q1Q8NGQ2 317 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 MCOLN3Q8TDD5 553 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 FCRL1Q96LA6 429 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 IP6K3Q96PC2 410 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 SH3GL3Q99963 347 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 GABARAPL3Q9BY60 117 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 AIG1Q9NVV5 245 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 PLEKHJ1Q9NW61 149 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 USE1Q9NZ43 259 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 IL37Q9NZH6 218 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 ASF1AQ9Y294 204 aa4.33□□□□□ -1.72
VPS53-219ENST00000576019 IGHV3-35A0A0C4DH35 117 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 ISPDA4D126 451 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 SYCE1LA8MT33 242 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 EPM2AB3EWF7 344 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 ATP8B1O43520 1251 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 HCRTO43612 131 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 MPZL2O60487 215 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 SNAP29O95721 258 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 C6orf47O95873 294 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 ACTR1BP42025 376 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 CDKN2CP42773 168 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 OR3A4PP47883 348 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 HMGA2P52926 109 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 RPL18AQ02543 176 aaKnown RBP4.32□□□□□ -1.72
VPS53-219ENST00000576019 PRR4Q16378 134 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 POU2AF1Q16633 256 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 FAM182AQ5T1J6 154 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 ANKRD22Q5VYY1 191 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 BAIAP2L2Q6UXY1 529 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 TMEM61Q8N0U2 210 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 PGAM4Q8N0Y7 254 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 CYP4Z2PQ8N1L4 340 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 CHST4Q8NCG5 386 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 LFNGQ8NES3 379 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 OR8G5Q8NG78 346 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 OR5AK3PQ8NH89 298 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 WFDC5Q8TCV5 224 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 GEMIN6Q8WXD5 167 aaKnown RBP4.32□□□□□ -1.72
VPS53-219ENST00000576019 ZBTB9Q96C00 473 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 RPUSD4Q96CM3 377 aaKnown RBP4.32□□□□□ -1.72
VPS53-219ENST00000576019 RNF145Q96MT1 663 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 CCL19Q99731 98 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 RASL11BQ9BPW5 248 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 PDCD1LG2Q9BQ51 273 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 POLR2J2Q9GZM3 115 aaKnown RBP4.32□□□□□ -1.72
VPS53-219ENST00000576019 POLR2J3Q9H1A7 115 aaKnown RBP4.32□□□□□ -1.72
VPS53-219ENST00000576019 DEFB127Q9H1M4 99 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 Q9H3A6 140 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 ZNF442Q9H7R0 627 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 SH2D2AQ9NP31 389 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 CFL2Q9Y281 166 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 ACOT9Q9Y305 439 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 WIF1Q9Y5W5 379 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 KCNE3Q9Y6H6 103 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 MPDZO75970 2070 aa4.32□□□□□ -1.72
VPS53-219ENST00000576019 DNAH7Q8WXX0 4024 aa4.31□□□□□ -1.72
VPS53-219ENST00000576019 TRAV17A0A0B4J275 112 aa4.31□□□□□ -1.72
VPS53-219ENST00000576019 A0A1B0GX12 115 aa4.31□□□□□ -1.72
VPS53-219ENST00000576019 CIB4A0PJX0 185 aa4.31□□□□□ -1.72
VPS53-219ENST00000576019 J3QLI3 93 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms