RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 VDAC1P21796 283 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 FUT6P51993 359 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 CDC42P60953 191 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 ROM1Q03395 351 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 SCN1BQ07699 218 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 ZNF616Q08AN1 781 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 MICAQ29983 383 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 C17orf58Q2M2W7 97 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 FAM53AQ6NSI3 398 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 MOB3BQ86TA1 216 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 TGIF2LXQ8IUE1 241 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 ELMOD2Q8IZ81 293 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 NIPSNAP1Q9BPW8 284 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 GNB4Q9HAV0 340 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 LIN7CQ9NUP9 197 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 OR52A1Q9UKL2 312 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 GSTK1Q9Y2Q3 226 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 ARPC2O15144 300 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 MAGEB4O15481 346 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 E2F6O75461 281 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 OR2H2O95918 312 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 RAB7AP51149 207 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 BNIP1Q12981 228 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 APOFQ13790 326 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 GINS1Q14691 196 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 ODF4Q2M2E3 257 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 KRBOX4Q5JUW0 171 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 SLC35D3Q5M8T2 416 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 PLEKHG7Q6ZR37 379 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 OR8H3Q8N146 312 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 BORCS8Q96FH0 119 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 EAF1Q96JC9 268 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 APOL4Q9BPW4 351 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 CCDC134Q9H6E4 229 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 PLEKHA1Q9HB21 404 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 EXOSC4Q9NPD3 245 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 COPS3Q9UNS2 423 aa12.63□□□□□ -0.39
CTDNEP1-211ENST00000575783 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 ZNF729A6NN14 1252 aaPredicted RBP12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 DHRS7CA6NNS2 312 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 CYB5AP00167 134 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 PSMB8P28062 276 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 GNG10P50151 68 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 GNB1P62873 340 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 CFHR3Q02985 330 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 LTC4SQ16873 150 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 SPIN3Q5JUX0 258 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 TMEM65Q6PI78 240 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 CATSPERDQ86XM0 798 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 Q8N9W7 124 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 OR6Q1Q8NGQ2 317 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 HAVCR2Q8TDQ0 301 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 ASB17Q8WXJ9 295 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 ST6GALNAC6Q969X2 333 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 KCTD7Q96MP8 289 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 RASL11BQ9BPW5 248 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 SPATA25Q9BR10 227 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 KLK15Q9H2R5 256 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 PSG11Q9UQ72 335 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 SAMHD1Q9Y3Z3 626 aaKnown RBP12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 R4GMQ9 66 aa12.62□□□□□ -0.39
CTDNEP1-211ENST00000575783 I3L521 148 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 MPZL2O60487 215 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 CCDC22O60826 627 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 SRSF10O75494 262 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 IFNA6P05013 189 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 REG1BP48304 166 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 CD300LDQ6UXZ3 194 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 OR10X1Q8NGY0 326 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 DLX4Q92988 240 aaPredicted RBP12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 COQ2Q96H96 371 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 UBE2E2Q96LR5 201 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 HSPB9Q9BQS6 159 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 GHITMQ9H3K2 345 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 MOB1AQ9H8S9 216 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 REEP1Q9H902 201 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 VSIG4Q9Y279 399 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 TMEM14AQ9Y6G1 99 aa12.61□□□□□ -0.39
CTDNEP1-211ENST00000575783 GATBO75879 557 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 HSD17B1P14061 328 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 ZNF44P15621 663 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 SLC2A5P22732 501 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 EBI3Q14213 229 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 ATXN7L3Q14CW9 347 aaPredicted RBP12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 ZNF491Q8N8L2 437 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 OR10G2Q8NGC3 310 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 OR2T10Q8NGZ9 312 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 CMTM5Q96DZ9 223 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 RBMXL1Q96E39 390 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 FEVQ99581 238 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 PPIL3Q9H2H8 161 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 C19orf73Q9NVV2 129 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 OR6C3Q9NZP0 311 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 SNX5Q9Y5X3 404 aa12.6□□□□□ -0.39
CTDNEP1-211ENST00000575783 IGHV1-3A0A0C4DH29 117 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms