RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 IFT22Q9H7X7 185 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 SPACA1Q9HBV2 294 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 MMP26Q9NRE1 261 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FBLN5Q9UBX5 448 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 DAPK2Q9UIK4 370 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 RPUSD1Q9UJJ7 312 aaKnown RBP11.58□□□□□ -0.56
RPAIN-217ENST00000575711 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FLNAP21333 2647 aaKnown RBP11.58□□□□□ -0.56
RPAIN-217ENST00000575711 TRBV23-1A0A0A0MS06 115 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 TRAV24A0A0B4J272 114 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 KIR2DS1A0A191URI9 304 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 A8MV72 311 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-217ENST00000575711 H3BUI4 141 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 HSPB6O14558 160 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 TMEM127O75204 238 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 LIPFP07098 398 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 SLC2A2P11168 524 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-217ENST00000575711 RPS19P39019 145 aaKnown RBP11.57□□□□□ -0.56
RPAIN-217ENST00000575711 OR3A1P47881 315 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 EDDM3BP56851 147 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 RPS27AP62979 156 aaKnown RBP11.57□□□□□ -0.56
RPAIN-217ENST00000575711 PAX2Q02962 417 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 UNC119Q13432 240 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 EDDM3AQ14507 147 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 ATAD3CQ5T2N8 411 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 FAHD2BQ6P2I3 314 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-217ENST00000575711 OR4S1Q8NGB4 309 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 C8orf46Q8TAG6 207 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 RAB2BQ8WUD1 216 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 FAHD2AQ96GK7 314 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 POM121Q96HA1 1249 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 TM2D1Q9BX74 207 aa11.57□□□□□ -0.56
RPAIN-217ENST00000575711 A0A0B4J203 849 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 TMEM272A0A1B0GTI8 110 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 A0A1W2PQ09 198 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 FUOMA2VDF0 154 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 J3QLI3 93 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 CSN2P05814 226 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 PPIAL4GP0DN37 164 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 KCNJ3P48549 501 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 TMBIM6P55061 237 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 RPL31P62899 125 aaKnown RBP11.56□□□□□ -0.56
RPAIN-217ENST00000575711 FAM189A2Q15884 450 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 IDNKQ5T6J7 187 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 METAP1DQ6UB28 335 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-217ENST00000575711 USP43Q70EL4 1123 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 FAM185AQ8N0U4 392 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 SUMF2Q8NBJ7 301 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 LY6G5BQ8NDX9 201 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 OR4M1Q8NGD0 313 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 DACT3Q96B18 629 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-217ENST00000575711 DMRTB1Q96MA1 342 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 BCL7BQ9BQE9 202 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 MRI1Q9BV20 369 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 DPCDQ9BVM2 203 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-217ENST00000575711 LPAR5Q9H1C0 372 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 ZNF581Q9P0T4 197 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 RAB22AQ9UL26 194 aa11.56□□□□□ -0.56
RPAIN-217ENST00000575711 A0A1W2PPH5 198 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 MCRIP1C9JLW8 97 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 LDLRAD4O15165 306 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 RAB6AP20340 208 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 ERP29P30040 261 aaKnown RBP11.55□□□□□ -0.56
RPAIN-217ENST00000575711 ATXN7L3Q14CW9 347 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-217ENST00000575711 CR1LQ2VPA4 569 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 RAB12Q6IQ22 244 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 Q71RC1 249 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-217ENST00000575711 BPIFB2Q8N4F0 458 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 NEK7Q8TDX7 302 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 SLC25A46Q96AG3 418 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 NEDD4LQ96PU5 975 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 NICN1Q9BSH3 213 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 BARHL1Q9BZE3 327 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 DCSTAMPQ9H295 470 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 C7orf69Q9H7B7 122 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 C19orf12Q9NSK7 152 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 RCC2Q9P258 522 aaKnown RBP11.55□□□□□ -0.56
RPAIN-217ENST00000575711 LPAR3Q9UBY5 353 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 PEX16Q9Y5Y5 336 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 YLPM1P49750 1951 aaKnown RBP11.55□□□□□ -0.56
RPAIN-217ENST00000575711 HIVEP1P15822 2718 aa11.55□□□□□ -0.56
RPAIN-217ENST00000575711 MALRD1Q5VYJ5 2156 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 hADV38S2A0JD32 116 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 PDCD6O75340 191 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 SNRPBP14678 240 aaKnown RBP11.54□□□□□ -0.56
RPAIN-217ENST00000575711 FUT3P21217 361 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 P2RX3P56373 397 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 SCAND1P57086 179 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 MEF2CQ06413 473 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-217ENST00000575711 PAX8Q06710 450 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 AESQ08117 197 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 RBM39Q14498 530 aaKnown RBP11.54□□□□□ -0.56
RPAIN-217ENST00000575711 KRBOX4Q5JUW0 171 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 NKAPLQ5M9Q1 402 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 CMTM4Q8IZR5 234 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 NDNFQ8TB73 568 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 LGALS14Q8TCE9 139 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 PTX4Q96A99 478 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 TMPRSS13Q9BYE2 586 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 TMEM160Q9NX00 188 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms