RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 KPTNQ9Y664 436 aa10.92□□□□□ -0.66
RPAIN-216ENST00000575599 MDFIC2A0A1B0GVS7 189 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 RPS19P39019 145 aaKnown RBP10.91□□□□□ -0.66
RPAIN-216ENST00000575599 RANBP1P43487 201 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 NPBWR2P48146 333 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 COL10A1Q03692 680 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 PRB3Q04118 309 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-216ENST00000575599 PDZK1IP1Q13113 114 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 FIP1L1Q6UN15 594 aaKnown RBP10.91□□□□□ -0.66
RPAIN-216ENST00000575599 Q8IYB0 196 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 ASCC1Q8N9N2 400 aaKnown RBP10.91□□□□□ -0.66
RPAIN-216ENST00000575599 C8orf46Q8TAG6 207 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 AP3S1Q92572 193 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 FOXRED1Q96CU9 486 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-216ENST00000575599 CPNE2Q96FN4 548 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-216ENST00000575599 ZNF48Q96MX3 618 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-216ENST00000575599 GPER1Q99527 375 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 TMEM138Q9NPI0 162 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 ESM1Q9NQ30 184 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 IL36RNQ9UBH0 155 aa10.91□□□□□ -0.66
RPAIN-216ENST00000575599 TRAV8-7A0A075B6U6 113 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 TRBV23-1A0A0A0MS06 115 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 CENPVL3A0A0U1RRI6 287 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 SMIM30A4D0T7 59 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 TRIM77I1YAP6 450 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 CLEC2LP0C7M8 214 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 PRKACAP17612 351 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 IGFBP3P17936 291 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-216ENST00000575599 DLX1P56177 255 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 PDCD1Q15116 288 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 DDI2Q5TDH0 399 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 FAM58AQ8N1B3 248 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 JAGN1Q8N5M9 183 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 KIR3DL3Q8N743 410 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-216ENST00000575599 NKAIN3Q8N8D7 197 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 OR4M1Q8NGD0 313 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 OR51A2Q8NGJ7 313 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 SLC25A46Q96AG3 418 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 DUX5Q96PT3 197 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 PLGRKTQ9HBL7 147 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 C19orf12Q9NSK7 152 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 V9GY05 133 aa10.9□□□□□ -0.66
RPAIN-216ENST00000575599 IGKV1-12A0A0C4DH73 117 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 NOTOA8MTQ0 251 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 HAND1O96004 215 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 IGKV1D-12P01611 117 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 TK1P04183 234 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 CHRM2P08172 466 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 ZNF182P17025 639 aaPredicted RBP10.9□□□□□ -0.67
RPAIN-216ENST00000575599 DUSP1P28562 367 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 BAMBIQ13145 260 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 KISS1Q15726 138 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 IDNKQ5T6J7 187 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 ASPHD2Q6ICH7 369 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 C9orf139Q6ZV77 190 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 LRRTM1Q86UE6 522 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 ZDHHC22Q8N966 263 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 DYNC2LI1Q8TCX1 351 aa10.9□□□□□ -0.67
RPAIN-216ENST00000575599 CCDC59Q9P031 241 aaKnown RBP10.9□□□□□ -0.67
RPAIN-216ENST00000575599 IGHV1-69DA0A0B4J2H0 117 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 DNAJC9-AS1A6NH13 148 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 KDM4BO94953 1096 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 ALX3O95076 343 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 IGHV1-69P01742 117 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 TMEM225BP0DP42 221 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 ZNF93P35789 620 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-216ENST00000575599 ZP1P60852 638 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 RPL31P62899 125 aaKnown RBP10.89□□□□□ -0.67
RPAIN-216ENST00000575599 UBA52P62987 128 aaKnown RBP10.89□□□□□ -0.67
RPAIN-216ENST00000575599 ACTG1P63261 375 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 KLRD1Q13241 179 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 EDDM3AQ14507 147 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 DEFB112Q30KQ8 113 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 SFXN4Q6P4A7 337 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 MZT2AQ6P582 158 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 CRIP3Q6Q6R5 217 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 Q8N7P7 452 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 SPATA3Q8NHX4 192 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 DMRTB1Q96MA1 342 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 S100A13Q99584 98 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 NKX3-1Q99801 234 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-216ENST00000575599 FAM234AQ9H0X4 552 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 PTTG2Q9NZH5 202 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 DAPK2Q9UIK4 370 aa10.89□□□□□ -0.67
RPAIN-216ENST00000575599 A0A1W2PRD5 423 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 A0A1W2PRF3 423 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 A0A1W2PRM7 423 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 SHISA3A0PJX4 238 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 TMEM82A0PJX8 343 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 MEX3AA1L020 520 aaKnown RBP10.88□□□□□ -0.67
RPAIN-216ENST00000575599 K7N7A8 449 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 M0R1W7 72 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 ZNF737O75373 536 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 ALDOBP05062 364 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 GABRR1P24046 479 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 EDDM3BP56851 147 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 OR10A3P58181 314 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 BPIFB3P59826 476 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 RAB11BQ15907 218 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms