RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 LINC00527Q9UJ94 153 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 IGKV1-27A0A075B6S5 117 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 KBTBD11-OT1A0A1B0GTJ5 212 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 FAM172BPA6NC97 362 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 ZNF670-ZNF695F2Z2N8 137 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 SIRPB1O00241 398 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 ENTPD6O75354 484 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 SRSF10O75494 262 aaKnown RBP7.06□□□□□ -1.28
SMG6-218ENST00000575454 CSN2P05814 226 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 MRPL3P09001 348 aaKnown RBP7.06□□□□□ -1.28
SMG6-218ENST00000575454 PRKACAP17612 351 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 PRKACBP22694 351 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 NFYBP25208 207 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 DUSP1P28562 367 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 GPR12P47775 334 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 MTCP1P56278 107 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 AESQ08117 197 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 BNIP1Q12981 228 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 GPR50Q13585 617 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 FHL3Q13643 280 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 HNF4GQ14541 408 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 BAIAP2L2Q6UXY1 529 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 SLC16A12Q6ZSM3 486 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 ZNF429Q86V71 674 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 ISOC1Q96CN7 298 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 CHST5Q9GZS9 411 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 HMG20AQ9NP66 347 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 RBFOX1Q9NWB1 397 aaKnown RBP7.06□□□□□ -1.28
SMG6-218ENST00000575454 STARD9Q9P2P6 4700 aa7.06□□□□□ -1.28
SMG6-218ENST00000575454 NCBP2LA6PVI3 153 aaKnown RBP7.05□□□□□ -1.28
SMG6-218ENST00000575454 PRR32B1ATL7 298 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 J3QR06 171 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 GNGT2O14610 69 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 MPZL2O60487 215 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 OR2H2O95918 312 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 IGKV1D-33P01593 117 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 IGKV1-33P01594 117 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 KRT8P05787 483 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 OR8U8P0C7N1 319 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 OR5H8P0DN80 308 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 HOXB6P17509 224 aaKnown RBP7.05□□□□□ -1.28
SMG6-218ENST00000575454 BCL3P20749 454 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 VDAC1P21796 283 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 C21orf33P30042 268 aaPredicted RBP7.05□□□□□ -1.28
SMG6-218ENST00000575454 GLIPR1P48060 266 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 NPBWR2P48146 333 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 POU3F4P49335 361 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 CXCR4P61073 352 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 DEFB136Q30KP8 78 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 KRBOX4Q5JUW0 171 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 DHFR2Q86XF0 187 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 SLC35F2Q8IXU6 374 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 DEFB107AQ8IZN7 70 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 ARHGAP24Q8N264 748 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 OR8H1Q8NGG4 311 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 OR10X1Q8NGY0 326 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 RNFT2Q96EX2 444 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 APOL4Q9BPW4 351 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 CHCHD6Q9BRQ6 235 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 PRRG3Q9BZD7 231 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 ABCG5Q9H222 651 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 NCOR1P1Q9H4R4 102 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 LIN7CQ9NUP9 197 aaKnown RBP7.05□□□□□ -1.28
SMG6-218ENST00000575454 GAR1Q9NY12 217 aaKnown RBP7.05□□□□□ -1.28
SMG6-218ENST00000575454 IL36RNQ9UBH0 155 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 COPS3Q9UNS2 423 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 GSTK1Q9Y2Q3 226 aa7.05□□□□□ -1.28
SMG6-218ENST00000575454 A0A1W2PPI3 338 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 TCRBV5S2A0A599 114 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 CCDC182A6NF36 153 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 JTBO76095 146 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 CST1P01037 141 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 IGHG4P01861 327 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 GAPDHP04406 335 aaKnown RBP7.04□□□□□ -1.28
SMG6-218ENST00000575454 FRMD6-AS1P0C7T7 363 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 OCM2P0CE71 109 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 OCMP0CE72 109 aaPredicted RBP7.04□□□□□ -1.28
SMG6-218ENST00000575454 RAP2AP10114 183 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 ANXA8P13928 327 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 ZNF44P15621 663 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 ATP6V1B2P21281 511 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 GDNFP39905 211 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 SNU13P55769 128 aaKnown RBP7.04□□□□□ -1.28
SMG6-218ENST00000575454 PDZK1IP1Q13113 114 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 EBI3Q14213 229 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 ZFAND6Q6FIF0 208 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 LHFPL2Q6ZUX7 228 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 OR11H1Q8NG94 326 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 OR10A7Q8NGE5 316 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 OR1N2Q8NGR9 330 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 OR2T10Q8NGZ9 312 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 SPSB1Q96BD6 273 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 KIRREL1Q96J84 757 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 RASL11BQ9BPW5 248 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 TTTY10Q9BZA0 68 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 BARHL1Q9BZE3 327 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 COMMD4Q9H0A8 199 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 LINC00574Q9H8X3 128 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 SLC25A19Q9HC21 320 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 NEK6Q9HC98 313 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms