RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 MBOAT4Q96T53 435 aa8.32□□□□□ -1.08
TVP23B-208ENST00000575261 GABARAPL3Q9BY60 117 aa8.32□□□□□ -1.08
TVP23B-208ENST00000575261 COMMD4Q9H0A8 199 aa8.32□□□□□ -1.08
TVP23B-208ENST00000575261 RHOFQ9HBH0 211 aa8.32□□□□□ -1.08
TVP23B-208ENST00000575261 PCDHB16Q9NRJ7 776 aa8.32□□□□□ -1.08
TVP23B-208ENST00000575261 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
TVP23B-208ENST00000575261 MOB4Q9Y3A3 225 aa8.32□□□□□ -1.08
TVP23B-208ENST00000575261 HSPE1-MOB4S4R3N1 261 aa8.32□□□□□ -1.08
TVP23B-208ENST00000575261 A0A087X0M5 115 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 A0A1B0GX30 115 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 SH2D7A6NKC9 451 aaPredicted RBP8.31□□□□□ -1.08
TVP23B-208ENST00000575261 ZNF729A6NN14 1252 aaPredicted RBP8.31□□□□□ -1.08
TVP23B-208ENST00000575261 E9PQ18 207 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 KDM4BO94953 1096 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 FCGR1AP12314 374 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 LMO1P25800 156 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 GDNFP39905 211 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 PRRX1P54821 245 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 KRTAP10-11P60412 298 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 ZNF85Q03923 595 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 EGFEM1PQ0D2K5 195 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 RBM39Q14498 530 aaKnown RBP8.31□□□□□ -1.08
TVP23B-208ENST00000575261 KIAA2026Q5HYC2 2103 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 C9orf152Q5JTZ5 239 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 KRBOX4Q5JUW0 171 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 C11orf87Q6NUJ2 197 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 C10orf99Q6UWK7 81 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 LINC00482Q8N8I6 264 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 CHST4Q8NCG5 386 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 OR5D18Q8NGL1 313 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 EME1Q96AY2 570 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 SLC7A6OSQ96CW6 309 aaPredicted RBP8.31□□□□□ -1.08
TVP23B-208ENST00000575261 RIBC2Q9H4K1 309 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 NEK6Q9HC98 313 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 OR6C3Q9NZP0 311 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 HHLA2Q9UM44 414 aa8.31□□□□□ -1.08
TVP23B-208ENST00000575261 AMMECR1Q9Y4X0 333 aaPredicted RBP8.31□□□□□ -1.08
TVP23B-208ENST00000575261 WI2-2373I1.2A0A1W2PRP0 233 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 PSMB11A5LHX3 300 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 SLC33A1O00400 549 aaPredicted RBP8.3□□□□□ -1.08
TVP23B-208ENST00000575261 MT-ND2P03891 347 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 FAM106CPP0CH98 169 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 HOXD3P31249 432 aaPredicted RBP8.3□□□□□ -1.08
TVP23B-208ENST00000575261 OR3A4PP47883 348 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 CD69Q07108 199 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 BNIP1Q12981 228 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 ATXN7L3Q14CW9 347 aaPredicted RBP8.3□□□□□ -1.08
TVP23B-208ENST00000575261 DEFB121Q5J5C9 76 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 SAXO1Q8IYX7 474 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 OR13C3Q8NGS6 347 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 OR13C9Q8NGT0 318 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 OR9G1Q8NH87 305 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 TOMM40LQ969M1 308 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 RNF166Q96A37 237 aaPredicted RBP8.3□□□□□ -1.08
TVP23B-208ENST00000575261 RPEQ96AT9 228 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 COQ2Q96H96 371 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 SPACA5Q96QH8 159 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 ZNF649Q9BS31 505 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 ING3Q9NXR8 418 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
TVP23B-208ENST00000575261 KBTBD11-OT1A0A1B0GTJ5 212 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 LY6LH3BQJ8 138 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 SLC16A6O15403 523 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 HTR1AP08908 422 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 NFYBP25208 207 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 SLC6A1P30531 599 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 POLR2IP36954 125 aaKnown RBP8.29□□□□□ -1.08
TVP23B-208ENST00000575261 GLP1RP43220 463 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 CCR9P51686 369 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 NANOS3P60323 173 aaKnown RBP8.29□□□□□ -1.08
TVP23B-208ENST00000575261 RPL23AP62750 156 aaKnown RBP8.29□□□□□ -1.08
TVP23B-208ENST00000575261 SCN1BQ07699 218 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 DCTN2Q13561 401 aaKnown RBP8.29□□□□□ -1.08
TVP23B-208ENST00000575261 C17orf58Q2M2W7 97 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 Q6P435 159 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 FDX2Q6P4F2 183 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 ETV3LQ6ZN32 361 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 KCTD20Q7Z5Y7 419 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 AMIGO2Q86SJ2 522 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 MRPL41Q8IXM3 137 aaKnown RBP8.29□□□□□ -1.08
TVP23B-208ENST00000575261 OR51A4Q8NGJ6 313 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 OR56B4Q8NH76 319 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 KIRREL1Q96J84 757 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 MCRIP2Q9BUT9 160 aaKnown RBP8.29□□□□□ -1.08
TVP23B-208ENST00000575261 PPIL3Q9H2H8 161 aaKnown RBP8.29□□□□□ -1.08
TVP23B-208ENST00000575261 IMPAD1Q9NX62 359 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 AP4S1Q9Y587 144 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 RYR3Q15413 4870 aa8.29□□□□□ -1.08
TVP23B-208ENST00000575261 DAPL1A0PJW8 107 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 FAM90A18PA6NE21 464 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 FAM90A16PA6NEW6 464 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 FAM90A20PA6NIJ5 464 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 FAM90A9PA6NNJ1 464 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 FAM90A12PA8MX19 464 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 FAM90A5PA8MXJ8 464 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 HSPB6O14558 160 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 DEGS1O15121 323 aa8.28□□□□□ -1.08
TVP23B-208ENST00000575261 SNRNP70P08621 437 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms