RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FAM90A20PA6NIJ5 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A7PA6NKC0 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A22PA8MWA6 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A12PA8MX19 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A5PA8MXJ8 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A23PA8MXZ1 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 SLC33A1O00400 549 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 PSPNO60542 156 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 OR7C1O76099 320 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A15PP0C7V4 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A13PP0C7W8 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A14PP0C7W9 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A24PP0C7X0 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 MGMTP16455 207 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 CD36P16671 472 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 EPHA1P21709 976 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 GUCA2AQ02747 115 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 EDDM3AQ14507 147 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 PIGYQ3MUY2 71 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 PAN3Q58A45 887 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 C22orf42Q6IC83 251 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 LYPD6Q86Y78 171 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 BPIFB2Q8N4F0 458 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 OR4S1Q8NGB4 309 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 OR4M1Q8NGD0 313 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 KCNG3Q8TAE7 436 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 BARHL1Q9BZE3 327 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 MS4A7Q9GZW8 240 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 SIRPDQ9H106 197 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 PPA2Q9H2U2 334 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 OCEL1Q9H607 264 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 IFT22Q9H7X7 185 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 C19orf12Q9NSK7 152 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 KIAA2026Q5HYC2 2103 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 TRGV10A0A0A0MS01 117 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 SLC17A2O00624 439 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 GEMIN2O14893 280 aaKnown RBP10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 SLC22A1O15245 554 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 BPNT1O95861 308 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 FSHBP01225 129 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 CD37P11049 281 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 MMP9P14780 707 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 ARSBP15848 533 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 RAB3BP20337 219 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 OR3A1P47881 315 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 P2RX3P56373 397 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 RBM39Q14498 530 aaKnown RBP10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 RAB11BQ15907 218 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 KRBOX4Q5JUW0 171 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 ATAD3CQ5T2N8 411 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 NCR3LG1Q68D85 454 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 TMEM200BQ69YZ2 307 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 GDPGP1Q6ZNW5 385 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 VMO1Q7Z5L0 202 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 TRAPPC6BQ86SZ2 158 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 ZNF418Q8TF45 676 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 KCTD7Q96MP8 289 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 TBX15Q96SF7 602 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 SELENOIQ9C0D9 397 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 TXNL4BQ9NX01 149 aaKnown RBP10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 LINC00312Q9Y6C7 94 aa10.51□□□□□ -0.73
TRAPPC1-206ENST00000573989 ANK3Q12955 4377 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 ZNF728P0DKX0 622 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 JUNBP17275 347 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 PRTN3P24158 256 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 TAF9Q16594 264 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 METAP1DQ6UB28 335 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 RBMS3Q6XE24 437 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 OR2W3Q7Z3T1 314 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 TPRA1Q86W33 373 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 ZNF565Q8N9K5 539 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 SUMF2Q8NBJ7 301 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 NEK7Q8TDX7 302 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 LHX4Q969G2 390 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 ZNF714Q96N38 554 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 CHCHD6Q9BRQ6 235 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 URM1Q9BTM9 101 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 DPCDQ9BVM2 203 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 SUCNR1Q9BXA5 334 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 TMEM59Q9BXS4 323 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 BANF2Q9H503 90 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 HEXA-AS1Q9H8Q6 139 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 UNKLQ9H9P5 680 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 SIRT7Q9NRC8 400 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 OR6C3Q9NZP0 311 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 UBE2J1Q9Y385 318 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 JMJD1CQ15652 2540 aa10.5□□□□□ -0.73
TRAPPC1-206ENST00000573989 A0A0A6YYJ9 748 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 TRAV24A0A0B4J272 114 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 LOC100506127A0A0U1RQW1 187 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 A0A1W2PP11 408 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 TRIM64CA6NLI5 447 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 MCRIP1C9JLW8 97 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 HSPB6O14558 160 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 TCF21O43680 179 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 MPIG6BO95866 241 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 RBP4P02753 201 aa10.49□□□□□ -0.73
TRAPPC1-206ENST00000573989 ERVFRD-1P60508 538 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms