RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 A0A1W2PRS3 328 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF716A6NP11 495 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 KIR3DP1A8MWS1 328 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 KLF7O75840 302 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-206ENST00000573852 ITGA3P26006 1051 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 OR8B8Q15620 311 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 SPSB3Q6PJ21 355 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 SUMF2Q8NBJ7 301 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 TCEAL3Q969E4 200 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 MAGT1Q9H0U3 335 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 SLC7A10Q9NS82 523 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 CDS2O95674 445 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 FGF5P12034 268 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 NKX2-1P43699 371 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-206ENST00000573852 EXT1Q16394 746 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 TBC1D26Q86UD7 250 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 RPS19BP1Q86WX3 136 aaKnown RBP16.43■□□□□ 0.22
SCARF1-206ENST00000573852 MR1Q95460 341 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 SLAMF9Q96A28 289 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 YPEL4Q96NS1 127 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 NCKAP5O14513 1909 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 RGS19P49795 217 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 CARD18P57730 90 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 CEACAM16Q2WEN9 425 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 CXorf66Q5JRM2 361 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-206ENST00000573852 SLC25A26Q70HW3 274 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 AAED1Q7RTV5 226 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF611Q8N823 705 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 OR14L1PQ8NHC6 308 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 SAP25Q8TEE9 199 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 FOXB1Q99853 325 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 PLSCR2Q9NRY7 297 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 UBE2J1Q9Y385 318 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-206ENST00000573852 PROB1E7EW31 1015 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 TXNL1O43396 289 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 SSSCA1O60232 199 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 CLN5O75503 358 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 EDN3P14138 238 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 STARD6P59095 220 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 RAB1AP62820 205 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 DPPA2Q7Z7J5 298 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 GGNQ86UU5 652 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 RBFOX3A6NFN3 312 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 K7ESF4 209 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 AP4M1O00189 453 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 PITX3O75364 302 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 OR2C1O95371 312 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 MAS1LP35410 378 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF266Q14584 549 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF695Q8IW36 515 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 ODF3L1Q8IXM7 274 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 SELENOHQ8IZQ5 122 aaKnown RBP16.42■□□□□ 0.22
SCARF1-206ENST00000573852 M1APQ8TC57 530 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 TMEM56Q96MV1 263 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 GLRX2Q9NS18 164 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF391Q9UJN7 358 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 TMEM56-RWDD3S4R434 201 aa16.42■□□□□ 0.22
SCARF1-206ENST00000573852 FRYLO94915 3013 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 VPS13AQ96RL7 3174 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF816-ZNF321PA0A0X1KG74 233 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 GJE1A6NN92 205 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 CXCL13O43927 109 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 SPIN3Q5JUX0 258 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 TMEM252Q8N6L7 170 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 PLEKHF2Q9H8W4 249 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 ADAM20O43506 726 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 MLF1P58340 268 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 SRPXP78539 464 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 EXTL1Q92935 676 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 TCEAL7Q9BRU2 100 aa16.41■□□□□ 0.22
SCARF1-206ENST00000573852 PAPOLGQ9BWT3 736 aaKnown RBP16.41■□□□□ 0.22
SCARF1-206ENST00000573852 DNPH1O43598 174 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 TMEM50AO95807 157 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 RND3P61587 244 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 TSC22D1Q15714 1073 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 HAGHQ16775 308 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 HIKESHIQ53FT3 197 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 TRIM61Q5EBN2 209 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 HEPN1Q6WQI6 88 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF818PQ6ZRF7 136 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 FAM185AQ8N0U4 392 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 OR5C1Q8NGR4 320 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 HS3ST6Q96QI5 342 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 LYRM2Q9NU23 88 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-206ENST00000573852 WNT16Q9UBV4 365 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 RPL36A-HNRNPH2H7BZ11 118 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 SLC33A1O00400 549 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-206ENST00000573852 ZNHIT1O43257 154 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 CST7O76096 145 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 AGBL5Q8NDL9 886 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 SMDT1Q9H4I9 107 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 MIOXQ9UGB7 285 aa16.4■□□□□ 0.22
SCARF1-206ENST00000573852 CCDC163A0A0D9SF12 145 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 ZNF727A8MUV8 499 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 KLK3P07288 261 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-206ENST00000573852 SCTP09683 121 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 RFPL3SP0C7P2 107 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 EPHA1P21709 976 aa16.39■□□□□ 0.21
SCARF1-206ENST00000573852 EIF2S3P41091 472 aaKnown RBP16.39■□□□□ 0.21
SCARF1-206ENST00000573852 DYNLT3P51808 116 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms