RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 OR5M11Q96RB7 305 aa7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 NR1H4Q96RI1 486 aaPredicted RBP7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 PRSS22Q9GZN4 317 aa7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 ZNF702PQ9H963 129 aa7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 SEBOXQ9HB31 216 aaPredicted RBP7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 RHOFQ9HBH0 211 aa7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 FAM118AQ9NWS6 357 aa7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 SMPD3Q9NY59 655 aaPredicted RBP7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 MINOS1-NBL1R4GNA1 71 aa7.79□□□□□ -1.16
NPLOC4-212ENST00000573328 ODAMA1E959 279 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 A6NDX4 124 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 E9PI62 339 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 E9PQ18 207 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 H0YJX3 145 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 TOR1AO14656 332 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 DEGS1O15121 323 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 MMP23AO75900 390 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 JUNBP17275 347 aaPredicted RBP7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 VDAC2P45880 294 aaPredicted RBP7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 GTF2A1P52655 376 aaPredicted RBP7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 RBM39Q14498 530 aaKnown RBP7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 RSU1Q15404 277 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 NSUN5P1Q3KNT7 163 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 PAN3Q58A45 887 aaKnown RBP7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 LDLRAD2Q5SZI1 272 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 ZNF691Q5VV52 312 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 CCBE1Q6UXH8 406 aaPredicted RBP7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 LYG1Q8N1E2 194 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 ABHD12Q8N2K0 398 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 PARP16Q8N5Y8 322 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 CHST4Q8NCG5 386 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 ZNF596Q8TC21 504 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 HAVCR2Q8TDQ0 301 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 TNFAIP8L1Q8WVP5 186 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 APH1BQ8WW43 257 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 CYGBQ8WWM9 190 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 CDCA4Q9BXL8 241 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 TAS2R4Q9NYW5 299 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 TAS2R3Q9NYW6 316 aa7.78□□□□□ -1.16
NPLOC4-212ENST00000573328 A0A0G2JK05 382 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 SLC33A1O00400 549 aaPredicted RBP7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 ALDOBP05062 364 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 MYL12AP19105 171 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 NFYBP25208 207 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 BRS3P32247 399 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 MTNR1BP49286 362 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 ZP1P60852 638 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 PPP3R1P63098 170 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 SMN1Q16637 294 aaKnown RBP7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 LRRC36Q1X8D7 754 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 TMEM95Q3KNT9 176 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 BAIAP2L2Q6UXY1 529 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 HEPN1Q6WQI6 88 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 TMPRSS11AQ6ZMR5 421 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 RTN4RL2Q86UN3 420 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 OR4P4Q8NGL7 312 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 OR10K1Q8NGX5 313 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 CNIH3Q8TBE1 160 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 GPR148Q8TDV2 347 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 AKR1E2Q96JD6 320 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 RDH12Q96NR8 316 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 S100A13Q99584 98 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 JAM3Q9BX67 310 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 PPIL3Q9H2H8 161 aaKnown RBP7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 OR6C3Q9NZP0 311 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 DPM3Q9P2X0 92 aa7.77□□□□□ -1.17
NPLOC4-212ENST00000573328 MEIKINA0A087WXM9 373 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 IRGMA1A4Y4 181 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 MEGF11A6BM72 1044 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 ZNF729A6NN14 1252 aaPredicted RBP7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 LEUTXA8MZ59 168 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 GABRPO00591 440 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 ALX3O95076 343 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 HTR3BO95264 441 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 CLIC3O95833 236 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 CSN2P05814 226 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 LIMS3P0CW19 117 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 LIMS4P0CW20 117 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 CD28P10747 220 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 CD24P25063 80 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 LMO1P25800 156 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 DCKP27707 260 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 GDNFP39905 211 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 CEACAM3P40198 252 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 OR3A4PP47883 348 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 ETV1P50549 477 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 DYNLT3P51808 116 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 PRRX1P54821 245 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 MED21Q13503 144 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 CDK5R1Q15078 307 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 OR2G6Q5TZ20 316 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 XAF1Q6GPH4 301 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 Q6P435 159 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 RPL22L1Q6P5R6 122 aaKnown RBP7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 SETD9Q8NE22 299 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 PXT1Q8NFP0 134 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 OR51A2Q8NGJ7 313 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 CFHR4Q92496 578 aa7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 RGP1Q92546 391 aaPredicted RBP7.76□□□□□ -1.17
NPLOC4-212ENST00000573328 CORO2AQ92828 525 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms