RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 GSTK1Q9Y2Q3 226 aa13.99□□□□□ -0.17
SMG6-212ENST00000573153 SIGLEC9Q9Y336 463 aa13.99□□□□□ -0.17
SMG6-212ENST00000573153 UBE2J1Q9Y385 318 aaPredicted RBP13.99□□□□□ -0.17
SMG6-212ENST00000573153 A0A0G2JK05 382 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 FUOMA2VDF0 154 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 GPX5O75715 221 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 TMEM225BP0DP42 221 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 GDNFP39905 211 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 EFNB2P52799 333 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 EDDM3AQ14507 147 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 UTF1Q5T230 341 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 BRICD5Q6PL45 260 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 OR51T1Q8NGJ9 327 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 PGLYRP3Q96LB9 341 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 PPA2Q9H2U2 334 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 VCXQ9H320 206 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 FKBP14Q9NWM8 211 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 CHCHD3Q9NX63 227 aaKnown RBP13.98□□□□□ -0.17
SMG6-212ENST00000573153 TAS2R4Q9NYW5 299 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 FBLN5Q9UBX5 448 aa13.98□□□□□ -0.17
SMG6-212ENST00000573153 H0YJX3 145 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 SIRPB1O00241 398 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 SLC33A1O00400 549 aaPredicted RBP13.97□□□□□ -0.17
SMG6-212ENST00000573153 GABRPO00591 440 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 MAGEB3O15480 346 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 CD1AP06126 327 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 IGFBP3P17936 291 aaPredicted RBP13.97□□□□□ -0.17
SMG6-212ENST00000573153 SOX2P48431 317 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 SNU13P55769 128 aaKnown RBP13.97□□□□□ -0.17
SMG6-212ENST00000573153 LGALS4P56470 323 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 TAS2R43P59537 309 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 RPS11P62280 158 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMG6-212ENST00000573153 PAX5Q02548 391 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 LY6EQ16553 131 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 YIF1BQ5BJH7 314 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 LIAT1Q6ZQX7 453 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 GHSRQ92847 366 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 FOXRED1Q96CU9 486 aaPredicted RBP13.97□□□□□ -0.17
SMG6-212ENST00000573153 COQ2Q96H96 371 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 NCOR1P1Q9H4R4 102 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 TMEM138Q9NPI0 162 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 TAS2R3Q9NYW6 316 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 IL36GQ9NZH8 169 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 SESN1Q9Y6P5 492 aa13.97□□□□□ -0.17
SMG6-212ENST00000573153 ANKRD65E5RJM6 399 aa13.96□□□□□ -0.17
SMG6-212ENST00000573153 IL13RA2Q14627 380 aa13.96□□□□□ -0.17
SMG6-212ENST00000573153 FBLN7Q53RD9 439 aa13.96□□□□□ -0.17
SMG6-212ENST00000573153 NHLRC3Q5JS37 347 aa13.96□□□□□ -0.17
SMG6-212ENST00000573153 RNLSQ5VYX0 342 aa13.96□□□□□ -0.17
SMG6-212ENST00000573153 HIST2H2BDQ6DRA6 164 aa13.96□□□□□ -0.17
SMG6-212ENST00000573153 WIPF2Q8TF74 440 aaPredicted RBP13.96□□□□□ -0.17
SMG6-212ENST00000573153 MALSU1Q96EH3 234 aa13.96□□□□□ -0.17
SMG6-212ENST00000573153 CDCA4Q9BXL8 241 aa13.96□□□□□ -0.17
SMG6-212ENST00000573153 TRGV10A0A0A0MS01 117 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 IGHV2-26A0A0B4J1V2 119 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 A6NDX4 124 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 XPNPEP2O43895 674 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 TSPAN15O95858 294 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 ZNF44P15621 663 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 FSTP19883 344 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 PTGFRP43088 359 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 KIR2DS4P43632 304 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 RAB13P51153 203 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 DYNLT3P51808 116 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 Q499Y3 187 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 MINOS1Q5TGZ0 78 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 HEPN1Q6WQI6 88 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 OR4P4Q8NGL7 312 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 TNFAIP8L1Q8WVP5 186 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 NKX3-1Q99801 234 aaPredicted RBP13.95□□□□□ -0.18
SMG6-212ENST00000573153 TMEM133Q9H2Q1 129 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 GAL3ST2Q9H3Q3 398 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 RANBP3Q9H6Z4 567 aaPredicted RBP13.95□□□□□ -0.18
SMG6-212ENST00000573153 IFT22Q9H7X7 185 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 ZNF702PQ9H963 129 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 RAB18Q9NP72 206 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 ZNF581Q9P0T4 197 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 NKX1-2Q9UD57 310 aaPredicted RBP13.95□□□□□ -0.18
SMG6-212ENST00000573153 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 MINOS1-NBL1R4GNA1 71 aa13.95□□□□□ -0.18
SMG6-212ENST00000573153 TRBV5-7A0A0A0MS05 114 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 ODAMA1E959 279 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 DEGS1O15121 323 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 ARG1P05089 322 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 CGB3P0DN86 165 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 CGB7P0DN87 165 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 BDKRB2P30411 391 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 GLIPR1P48060 266 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 WNT4P56705 351 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 PPP3R1P63098 170 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 BDH1Q02338 343 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 Q8N2B8 174 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 DNAH3Q8TD57 4116 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 GPER1Q99527 375 aa13.94□□□□□ -0.18
SMG6-212ENST00000573153 TRAV24A0A0B4J272 114 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 FAM90A22PA8MWA6 464 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 CD34P28906 385 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 C21orf33P30042 268 aaPredicted RBP13.93□□□□□ -0.18
SMG6-212ENST00000573153 ZNF93P35789 620 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms