RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ZFAND6Q6FIF0 208 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 SCGB1D4Q6XE38 83 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 GDPGP1Q6ZNW5 385 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 FA2HQ7L5A8 372 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF550Q7Z398 422 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 CDC20BQ86Y33 519 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 TGIF2LYQ8IUE0 185 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 C9orf40Q8IXQ3 194 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 OSR2Q8N2R0 312 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 OR10G4Q8NGN3 311 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 PRSS3P2Q8NHM4 247 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF420Q8TAQ5 688 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 GNPDA2Q8TDQ7 276 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 NABP1Q96AH0 204 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 SLC35G5Q96KT7 338 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 LINC00477Q96M19 166 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 KLF6Q99612 283 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 RNF126Q9BV68 326 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 TMEM126AQ9H061 195 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 KLK15Q9H2R5 256 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 MOB1AQ9H8S9 216 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 UBQLN4Q9NRR5 601 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 RSL24D1Q9UHA3 163 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 PRNDQ9UKY0 176 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 YTHDF2Q9Y5A9 579 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 INSL5Q9Y5Q6 135 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 COL4A3Q01955 1670 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 A0A0G2JRQ6 117 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 GMNCA6NCL1 334 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 FAM183AA6NL82 134 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 LINC01548A6NM66 108 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 K7EQS6 105 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 UPK2O00526 184 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 SLC17A2O00624 439 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 AGPAT2O15120 278 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 DEGS1O15121 323 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 CHST10O43529 356 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 FGF17O60258 216 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 PDCD6O75340 191 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 ZFAND5O76080 213 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 OR2A4O95047 310 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 NXPH4O95158 308 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 CDRT1O95170 752 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 IGHG2P01859 326 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 CSF3P09919 207 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 CDK2P24941 298 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 DRD3P35462 400 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 PLA2G5P39877 138 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 MDH2P40926 338 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 CD200P41217 278 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 PSMB2P49721 201 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 KLK7P49862 253 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 PIGPP57054 158 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 CACNG7P62955 275 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 CDK5Q00535 292 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF616Q08AN1 781 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 DAZAP2Q15038 168 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 RNASE10Q5GAN6 216 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 UFSP1Q6NVU6 142 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 ALKAL1Q6UXT8 129 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 GOLT1AQ6ZVE7 132 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 UMODL1-AS1Q8N2C9 162 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 C6orf223Q8N319 242 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 FAM71E2Q8N5Q1 922 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 METTL27Q8N6F8 245 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 AQP11Q8NBQ7 271 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 GPR26Q8NDV2 337 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 OR11H6Q8NGC7 330 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 OR51S1Q8NGJ8 323 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 OR10J6PQ8NGY7 276 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 OR4S2Q8NH73 311 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 LRRC29Q8WV35 223 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 GALMQ96C23 342 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 GALNT14Q96FL9 552 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 BMFQ96LC9 184 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 OR2A7Q96R45 310 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 SERPINI1Q99574 410 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 TMEM70Q9BUB7 260 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 C1orf50Q9BV19 199 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 PBDC1Q9BVG4 233 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 HES4Q9HCC6 221 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 SIX2Q9NPC8 291 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 MMP26Q9NRE1 261 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 ACER3Q9NUN7 267 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 TMEM100Q9NV29 134 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 MRPL27Q9P0M9 148 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 PCYOX1Q9UHG3 505 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 PKIGQ9Y2B9 76 aa3.98□□□□□ -1.77
TOPBP1-210ENST00000572787 NPHP4O75161 1426 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 MYO15BQ96JP2 1530 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 IGHV4OR15-8A0A075B7B6 117 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 IGHV3OR16-13A0A075B7E8 117 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 A0A087WWV3 80 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SAA2-SAA4A0A096LPE2 208 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 TEX48A0A1B0GUV7 120 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SMIM35A0A1B0GVV1 85 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 A0A1B0GXF2 115 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 hADV38S2A0JD32 116 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 CCDC160A6NGH7 325 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms