RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 EFCAB10A6NFE3 127 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 ODF3BA8MYP8 253 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 H0YJX3 145 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 CLPXO76031 633 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 CDRT1O95170 752 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 LMO1P25800 156 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 ERP29P30040 261 aaKnown RBP14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 MTNR1BP49286 362 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 RSU1Q15404 277 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 PIGYQ3MUY2 71 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 KRBOX4Q5JUW0 171 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 DDI2Q5TDH0 399 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 ZNF626Q68DY1 528 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 SLC35E4Q6ICL7 350 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 OR11H6Q8NGC7 330 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 NDNFQ8TB73 568 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 ZNF696Q9H7X3 374 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 RHOFQ9HBH0 211 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 ING4Q9UNL4 249 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 UBE2J1Q9Y385 318 aaPredicted RBP14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 HILPDAQ9Y5L2 63 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 IGHV2-26A0A0B4J1V2 119 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 FAM90A8PA6NJQ4 464 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 HTR3BO95264 441 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 JUNBP17275 347 aaPredicted RBP14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 C21orf33P30042 268 aaPredicted RBP14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 PROK1P58294 105 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 DMKNQ6E0U4 476 aaPredicted RBP14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 CHST4Q8NCG5 386 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 PXT1Q8NFP0 134 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 PIFOQ8TCI5 191 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 COQ2Q96H96 371 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 PPIL3Q9H2H8 161 aaKnown RBP14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 TMEM133Q9H2Q1 129 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 TMEM138Q9NPI0 162 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 PSORS1C1Q9UIG5 152 aa14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 TBL2Q9Y4P3 447 aaKnown RBP14.39□□□□□ -0.11
CTDNEP1-207ENST00000572043 ODAMA1E959 279 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 FUOMA2VDF0 154 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 MAGEA13PA6NCF6 341 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 MYL12BO14950 172 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 CHST1O43916 411 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 TSPAN9O75954 239 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 CDK2P24941 298 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 BDKRB2P30411 391 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 GABRA5P31644 462 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 ZNF93P35789 620 aaPredicted RBP14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 GDNFP39905 211 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 PTGFRP43088 359 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 SLC34A1Q06495 639 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 RIPK1Q13546 671 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 DOC2BQ14184 412 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 PAN3Q58A45 887 aaKnown RBP14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 ZNF485Q8NCK3 441 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 FBLIM1Q8WUP2 373 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 TFAP2CQ92754 450 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 FOXRED1Q96CU9 486 aaPredicted RBP14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 PGLYRP3Q96LB9 341 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 CITED1Q99966 193 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 CLEC7AQ9BXN2 247 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 GAL3ST2Q9H3Q3 398 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 C16orf95Q9H693 158 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 DCLRE1BQ9H816 532 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 ABCB10Q9NRK6 738 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 CNOT2Q9NZN8 540 aaKnown RBP14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 ZNF581Q9P0T4 197 aa14.38□□□□□ -0.11
CTDNEP1-207ENST00000572043 TRAV8-7A0A075B6U6 113 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 TRBV5-5A0A0J9YX44 114 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 ERICH4A6NGS2 130 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 ALDOBP05062 364 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 RPS11P62280 158 aaKnown RBP eCLIP14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 AANATQ16613 207 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 Q499Y3 187 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 YIF1BQ5BJH7 314 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 ELP2Q6IA86 826 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 TMEM219Q86XT9 240 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 ABHD12Q8N2K0 398 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 MALSU1Q96EH3 234 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR14A2Q96R54 314 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 METTL9Q9H1A3 318 aa14.37□□□□□ -0.11
CTDNEP1-207ENST00000572043 MEIKINA0A087WXM9 373 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 TRAV24A0A0B4J272 114 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 CSN2P05814 226 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 CELP19835 753 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 SERPINA2P20848 420 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 GLP1RP43220 463 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 AQP4P55087 323 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 HIST2H2BDQ6DRA6 164 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 CCBE1Q6UXH8 406 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 TREML4Q6UXN2 200 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR4C13Q8NGP0 309 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 NRG4Q8WWG1 115 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 S100A13Q99584 98 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 ZNF184Q99676 751 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 TCF7L1Q9HCS4 588 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 PLCXD1Q9NUJ7 323 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 TAS2R3Q9NYW6 316 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 CKLFQ9UBR5 152 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 KIF25Q9UIL4 384 aa14.36□□□□□ -0.11
CTDNEP1-207ENST00000572043 TENM1Q9UKZ4 2725 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms