RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 Q6ZTK2 550 aa13.76□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ZNF555Q8NEP9 628 aa13.76□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OR5D18Q8NGL1 313 aa13.76□□□□□ -0.21
MAP1LC3B-208ENST00000570189 RGP1Q92546 391 aaPredicted RBP13.76□□□□□ -0.21
MAP1LC3B-208ENST00000570189 COQ2Q96H96 371 aa13.76□□□□□ -0.21
MAP1LC3B-208ENST00000570189 SERTAD4Q9NUC0 356 aa13.76□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ODAMA1E959 279 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 MMP23AO75900 390 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TSPAN15O95858 294 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ALDOBP05062 364 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 HCKP08631 526 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 RAB3AP20336 220 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 HTR1DP28221 377 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 DEFA6Q01524 100 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 IL13RA2Q14627 380 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 C16orf82Q7Z2V1 217 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 KLHDC1Q8N7A1 406 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 PACRGLQ8N7B6 248 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ZNF596Q8TC21 504 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 GPR148Q8TDV2 347 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TSEN15Q8WW01 171 aaKnown RBP13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 CREB3L1Q96BA8 519 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 LINC00574Q9H8X3 128 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 DIMT1Q9UNQ2 313 aaKnown RBP13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 SIGLEC9Q9Y336 463 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 PLXNB1O43157 2135 aa13.75□□□□□ -0.21
MAP1LC3B-208ENST00000570189 MEX3AA1L020 520 aaKnown RBP13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ZNF729A6NN14 1252 aaPredicted RBP13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 CD2P06729 351 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 CSF1P09603 554 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 CGB3P0DN86 165 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 CGB7P0DN87 165 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TMEM225BP0DP42 221 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 CALCBP10092 127 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ZNF44P15621 663 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 GLIPR1P48060 266 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 KCNJ3P48549 501 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 SNU13P55769 128 aaKnown RBP13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 DYNC1I2Q13409 638 aaKnown RBP13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 SMN1Q16637 294 aaKnown RBP13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 NHLRC3Q5JS37 347 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TMPRSS11AQ6ZMR5 421 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TRAPPC6BQ86SZ2 158 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 IFT22Q9H7X7 185 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 IL36GQ9NZH8 169 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OR6C3Q9NZP0 311 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 DPM3Q9P2X0 92 aa13.74□□□□□ -0.21
MAP1LC3B-208ENST00000570189 DEGS1O15121 323 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OGG1O15527 345 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 CDK2P24941 298 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 PTGFRP43088 359 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ETV1P50549 477 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 RAB13P51153 203 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 GTF2A1P52655 376 aaPredicted RBP13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 AESQ08117 197 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 KRBOX4Q5JUW0 171 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TTC23Q5W5X9 447 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 XAF1Q6GPH4 301 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ABHD12Q8N2K0 398 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 NDNFQ8TB73 568 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 STMN2Q93045 179 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 SMIM19Q96E16 107 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 PRSS22Q9GZN4 317 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 HSPE1-MOB4S4R3N1 261 aa13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 PRKDCP78527 4128 aaKnown RBP13.73□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 H3BUI4 141 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 F2RL2O00254 374 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 GABRPO00591 440 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 MAGEB3O15480 346 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 GPX5O75715 221 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ADARB1P78563 741 aaKnown RBP13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 C17orf58Q2M2W7 97 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 PLA1AQ53H76 456 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 PRAMEF5Q5TYX0 476 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ZNF485Q8NCK3 441 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 SETD9Q8NE22 299 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OR51A2Q8NGJ7 313 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OR52N1Q8NH53 320 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 CNIH3Q8TBE1 160 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TMEM106AQ96A25 262 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 BABAM2Q9NXR7 383 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 FOXJ3Q9UPW0 622 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 EXOSC1Q9Y3B2 195 aaKnown RBP13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 HILPDAQ9Y5L2 63 aa13.72□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TRAV24A0A0B4J272 114 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 KBTBD11-OT1A0A1B0GTJ5 212 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 LEUTXA8MZ59 168 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 LY6LH3BQJ8 138 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 BAG2O95816 211 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OPN1MWP04001 364 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OPN1MW2P0DN77 364 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OPN1MW3P0DN78 364 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ARHGDIBP52566 201 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 SLC34A1Q06495 639 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 LINC00596Q86U02 117 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TMEM219Q86XT9 240 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 OR4D6Q8NGJ1 314 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms