RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 COQ2Q96H96 371 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 OR14A2Q96R54 314 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 FAM192AQ9GZU8 254 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 PAK1IP1Q9NWT1 392 aaPredicted RBP10.59□□□□□ -0.71
CNOT1-220ENST00000569916 MMP24Q9Y5R2 645 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 BTBD17A6NE02 478 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 H3BUX3 64 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 DEGS1O15121 323 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 CLPXO76031 633 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 CDRT1O95170 752 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 CD1AP06126 327 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 CELP19835 753 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 MYF6P23409 242 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 PAX6P26367 422 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 ZNF93P35789 620 aaPredicted RBP10.58□□□□□ -0.72
CNOT1-220ENST00000569916 PTGFRP43088 359 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 GLIPR1P48060 266 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 BDH1Q02338 343 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 AESQ08117 197 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 IL13RA2Q14627 380 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 ATXN7L3Q14CW9 347 aaPredicted RBP10.58□□□□□ -0.72
CNOT1-220ENST00000569916 RSU1Q15404 277 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 ZNF626Q68DY1 528 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 GDPGP1Q6ZNW5 385 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 LHFPL4Q7Z7J7 247 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 OR11H6Q8NGC7 330 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 OR13D1Q8NGV5 346 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 OR4F5Q8NH21 305 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 OR5R1Q8NH85 324 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 SGCDQ92629 289 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 DERL3Q96Q80 235 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 CDCA4Q9BXL8 241 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 ANKRD60Q9BZ19 345 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 MEGF9Q9H1U4 602 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 IL36GQ9NZH8 169 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 ERGIC3Q9Y282 383 aa10.58□□□□□ -0.72
CNOT1-220ENST00000569916 UBE2J1Q9Y385 318 aaPredicted RBP10.58□□□□□ -0.72
CNOT1-220ENST00000569916 A0A1W2PPK0 400 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 FAM90A8PA6NJQ4 464 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 POM121CA8CG34 1229 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 PTGES3LE9PB15 166 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 MMP23AO75900 390 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 SLC35A2P78381 396 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 LRRC75BQ2VPJ9 315 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 PIGYQ3MUY2 71 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 LDLRAD2Q5SZI1 272 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 SHISA2Q6UWI4 295 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 TRAPPC6BQ86SZ2 158 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 DYNAPQ8N1N2 210 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 CORO2AQ92828 525 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 MYDGFQ969H8 173 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 OR5M11Q96RB7 305 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 NR1H4Q96RI1 486 aaPredicted RBP10.57□□□□□ -0.72
CNOT1-220ENST00000569916 ZNF184Q99676 751 aaPredicted RBP10.57□□□□□ -0.72
CNOT1-220ENST00000569916 SSX3Q99909 188 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 MND1Q9BWT6 205 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 PPIL3Q9H2H8 161 aaKnown RBP10.57□□□□□ -0.72
CNOT1-220ENST00000569916 BEX1Q9HBH7 125 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 SCN3BQ9NY72 215 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 CKLFQ9UBR5 152 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 LSM2Q9Y333 95 aaKnown RBP10.57□□□□□ -0.72
CNOT1-220ENST00000569916 TBL2Q9Y4P3 447 aaKnown RBP10.57□□□□□ -0.72
CNOT1-220ENST00000569916 SESN1Q9Y6P5 492 aa10.57□□□□□ -0.72
CNOT1-220ENST00000569916 TRGV10A0A0A0MS01 117 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 IGHV2-26A0A0B4J1V2 119 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 TRAV24A0A0B4J272 114 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 A0A1B0GUS0 222 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 ODAMA1E959 279 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 FUOMA2VDF0 154 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 HSPB6O14558 160 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 PIN1P1O15428 100 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 HTR3BO95264 441 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 ARG1P05089 322 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 TGFBR2P37173 567 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 LGALS4P56470 323 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 IRF3Q14653 427 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 AANATQ16613 207 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 KIAA2026Q5HYC2 2103 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 NHLRC3Q5JS37 347 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 KRBOX4Q5JUW0 171 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
CNOT1-220ENST00000569916 IZUMO2Q6UXV1 221 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 WFDC12Q8WWY7 111 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 SLITRK2Q9H156 845 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 METTL9Q9H1A3 318 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 TMEM133Q9H2Q1 129 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 VCX3BQ9H321 246 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 GAL3ST2Q9H3Q3 398 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 ING3Q9NXR8 418 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 TAS2R3Q9NYW6 316 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 ZNF581Q9P0T4 197 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 ING4Q9UNL4 249 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 FOXJ3Q9UPW0 622 aa10.56□□□□□ -0.72
CNOT1-220ENST00000569916 CLPSL1A2RUU4 121 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 H0YHG0 523 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 SERPINA2P20848 420 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 GDNFP39905 211 aa10.55□□□□□ -0.72
CNOT1-220ENST00000569916 RBM11P57052 281 aaKnown RBP10.55□□□□□ -0.72
CNOT1-220ENST00000569916 PAN3Q58A45 887 aaKnown RBP10.55□□□□□ -0.72
CNOT1-220ENST00000569916 PRAMEF5Q5TYX0 476 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms