RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 FAM58AQ8N1B3 248 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 Q8N1Y9 231 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 ZNF491Q8N8L2 437 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 CCDC54Q8NEL0 328 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 OR10X1Q8NGY0 326 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 MYOZ3Q8TDC0 251 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 GATAD1Q8WUU5 269 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 SLAMF9Q96A28 289 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 RCN3Q96D15 328 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 LRGUKQ96M69 825 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 KCTD7Q96MP8 289 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 YIPF3Q9GZM5 350 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 GORASP2Q9H8Y8 452 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 EXOSC4Q9NPD3 245 aaKnown RBP6.72□□□□□ -1.33
SMG1-216ENST00000569122 SAR1AQ9NR31 198 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 STUB1Q9UNE7 303 aa6.72□□□□□ -1.33
SMG1-216ENST00000569122 RYR1P21817 5038 aa6.71□□□□□ -1.33
SMG1-216ENST00000569122 MAGEA13PA6NCF6 341 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 H0Y980 276 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 TNFRSF11BO00300 401 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 NME4O00746 187 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 SELENOFO60613 162 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 EDF1O60869 148 aaKnown RBP6.71□□□□□ -1.34
SMG1-216ENST00000569122 CCNB2O95067 398 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 MOSP00540 346 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 GASTP01350 101 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 C21orf33P30042 268 aaPredicted RBP6.71□□□□□ -1.34
SMG1-216ENST00000569122 ZNF816Q0VGE8 651 aaPredicted RBP6.71□□□□□ -1.34
SMG1-216ENST00000569122 GALEQ14376 348 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 KRBOX4Q5JUW0 171 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 MOB3BQ86TA1 216 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 GTSCR1Q86UQ5 136 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 IZUMO1Q8IYV9 350 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 ZNF679Q8IYX0 411 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 Q8N9W7 124 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 CHST4Q8NCG5 386 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 OR10A7Q8NGE5 316 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 OR8D4Q8NGM9 314 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 TEX47Q8TBZ9 253 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 DLX4Q92988 240 aaPredicted RBP6.71□□□□□ -1.34
SMG1-216ENST00000569122 FLYWCH2Q96CP2 140 aaKnown RBP6.71□□□□□ -1.34
SMG1-216ENST00000569122 BORCS8Q96FH0 119 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 EAF1Q96JC9 268 aaPredicted RBP6.71□□□□□ -1.34
SMG1-216ENST00000569122 CADM1Q9BY67 442 aaKnown RBP6.71□□□□□ -1.34
SMG1-216ENST00000569122 PLEKHA1Q9HB21 404 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 RHOFQ9HBH0 211 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 ERGIC3Q9Y282 383 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 U3KQV3 271 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 V9GYS6 101 aa6.71□□□□□ -1.34
SMG1-216ENST00000569122 LOC110117498-PIK3R3F6TDL0 507 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 F8VVB4 439 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 F8VWA3 439 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 PRKACAP17612 351 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 IL3RAP26951 378 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 CD1BP29016 333 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 RAB9AP51151 201 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 ATP1B3P54709 279 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 ROM1Q03395 351 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 AESQ08117 197 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 ASPHD1Q5U4P2 390 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 RNLSQ5VYX0 342 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 HACD2Q6Y1H2 254 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 Q6ZSR3 168 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 AQP11Q8NBQ7 271 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 OR14K1Q8NGZ2 314 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 C10orf35Q96D05 121 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 KIRREL1Q96J84 757 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 S1PR3Q99500 378 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 BTBD10Q9BSF8 475 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 TEX12Q9BXU0 123 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 NCOR1P1Q9H4R4 102 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 MED20Q9H944 212 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 GNB4Q9HAV0 340 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 GMPR2Q9P2T1 348 aaKnown RBP6.7□□□□□ -1.34
SMG1-216ENST00000569122 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMG1-216ENST00000569122 MAGEL2Q9UJ55 1249 aa6.7□□□□□ -1.34
SMG1-216ENST00000569122 V9GYY5 206 aaPredicted RBP6.7□□□□□ -1.34
SMG1-216ENST00000569122 PLECQ15149 4684 aaKnown RBP6.69□□□□□ -1.34
SMG1-216ENST00000569122 IGHV1-3A0A0C4DH29 117 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 C12orf77C9JDV5 145 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 H3BN98 237 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 SIRPB1O00241 398 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 HSD17B6O14756 317 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 ENTPD6O75354 484 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 INMTO95050 263 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 OR2H2O95918 312 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 TTRP02766 147 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 SEMG1P04279 462 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 HMGN1P05114 100 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 DUSP1P28562 367 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 GDNFP39905 211 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 RBP2P50120 134 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 RPS7P62081 194 aaKnown RBP6.69□□□□□ -1.34
SMG1-216ENST00000569122 GNB1P62873 340 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 MFGE8Q08431 387 aaPredicted RBP6.69□□□□□ -1.34
SMG1-216ENST00000569122 APOFQ13790 326 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 KIAA0141Q14154 515 aaPredicted RBP6.69□□□□□ -1.34
SMG1-216ENST00000569122 C17orf58Q2M2W7 97 aa6.69□□□□□ -1.34
SMG1-216ENST00000569122 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
SMG1-216ENST00000569122 BCL2L15Q5TBC7 163 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms