RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 KLHL22Q53GT1 634 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 KIAA2026Q5HYC2 2103 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 MINOS1Q5TGZ0 78 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 PRAMEF5Q5TYX0 476 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 RPL22L1Q6P5R6 122 aaKnown RBP6.3□□□□□ -1.4
CDH3-209ENST00000569080 HEPN1Q6WQI6 88 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 ASCL4Q6XD76 172 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 Q8N2B8 174 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 CHST4Q8NCG5 386 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 ZNF555Q8NEP9 628 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 OR51T1Q8NGJ9 327 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 OR5D14Q8NGL3 314 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 OR13C5Q8NGS8 318 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 OR13D1Q8NGV5 346 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 OR52N1Q8NH53 320 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 GPR148Q8TDV2 347 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 TSEN15Q8WW01 171 aaKnown RBP6.3□□□□□ -1.4
CDH3-209ENST00000569080 CFHR4Q92496 578 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 STMN2Q93045 179 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 TMEM106AQ96A25 262 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 MALSU1Q96EH3 234 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 MYCBPQ99417 103 aaPredicted RBP6.3□□□□□ -1.4
CDH3-209ENST00000569080 CDCA4Q9BXL8 241 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 CLEC7AQ9BXN2 247 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 PPIL3Q9H2H8 161 aaKnown RBP6.3□□□□□ -1.4
CDH3-209ENST00000569080 MMP27Q9H306 513 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 ZNF702PQ9H963 129 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 C8orf4Q9NR00 106 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 ZNF581Q9P0T4 197 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 MINOS1-NBL1R4GNA1 71 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 TGP01266 2768 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 TET2Q6N021 2002 aaPredicted RBP6.3□□□□□ -1.4
CDH3-209ENST00000569080 A0A087X0M5 115 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 A0A1B0GX30 115 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 M0QZ24 198 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 SH2D1BO14796 132 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 TIMM23O14925 209 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 ALDOBP05062 364 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 OCM2P0CE71 109 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 OCMP0CE72 109 aaPredicted RBP6.29□□□□□ -1.4
CDH3-209ENST00000569080 CGB3P0DN86 165 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 CGB7P0DN87 165 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 TMEM225BP0DP42 221 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 ZNF44P15621 663 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 IGFBP3P17936 291 aaPredicted RBP6.29□□□□□ -1.4
CDH3-209ENST00000569080 FSTP19883 344 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 RAB3AP20336 220 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 CDK2P24941 298 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 OR3A4PP47883 348 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 MTNR1BP49286 362 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 RAB13P51153 203 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 LGALS4P56470 323 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 AESQ08117 197 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 HABP2Q14520 560 aaPredicted RBP6.29□□□□□ -1.4
CDH3-209ENST00000569080 IL13RA2Q14627 380 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 ATXN7L3Q14CW9 347 aaPredicted RBP6.29□□□□□ -1.4
CDH3-209ENST00000569080 FAM189A2Q15884 450 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 PIGYQ3MUY2 71 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 NHLRC3Q5JS37 347 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 OGFRL1Q5TC84 451 aaPredicted RBP6.29□□□□□ -1.4
CDH3-209ENST00000569080 TTC23Q5W5X9 447 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 HIST2H2BDQ6DRA6 164 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 DMKNQ6E0U4 476 aaPredicted RBP6.29□□□□□ -1.4
CDH3-209ENST00000569080 TMEM219Q86XT9 240 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 KLHDC1Q8N7A1 406 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 OR4C13Q8NGP0 309 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 TNFAIP8L1Q8WVP5 186 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 CYGBQ8WWM9 190 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 ORAI1Q96D31 301 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 NPFFR1Q9GZQ6 430 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 GAL3ST2Q9H3Q3 398 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 LINC00574Q9H8X3 128 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 ZNF286AQ9HBT8 521 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 NEK6Q9HC98 313 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 TCF7L1Q9HCS4 588 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 RAB18Q9NP72 206 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 SERTAD4Q9NUC0 356 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 TAS2R3Q9NYW6 316 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 IL36GQ9NZH8 169 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 FOXJ3Q9UPW0 622 aa6.29□□□□□ -1.4
CDH3-209ENST00000569080 EXOSC1Q9Y3B2 195 aaKnown RBP6.29□□□□□ -1.4
CDH3-209ENST00000569080 TRAV8-7A0A075B6U6 113 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 TRGV10A0A0A0MS01 117 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 TRBV5-7A0A0A0MS05 114 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 IRGMA1A4Y4 181 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 FAM172BPA6NC97 362 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 H0YJX3 145 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 LY6LH3BQJ8 138 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 HSPB6O14558 160 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 CAPGP40121 348 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 PTGFRP43088 359 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 BDH1Q02338 343 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 DYNC1I2Q13409 638 aaKnown RBP6.28□□□□□ -1.4
CDH3-209ENST00000569080 KRBOX4Q5JUW0 171 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 RSBN1Q5VWQ0 802 aaPredicted RBP6.28□□□□□ -1.4
CDH3-209ENST00000569080 C11orf88Q6PI97 169 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 TMPRSS11AQ6ZMR5 421 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 Q6ZS46 218 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 TRAPPC6BQ86SZ2 158 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 LYPD6Q86Y78 171 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms