RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CCDC159P0C7I6 412 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 OR2T7P0C7T2 308 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 DUSP1P28562 367 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 POU3F4P49335 361 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 ODF4Q2M2E3 257 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 FAHD1Q6P587 224 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 C8orf86Q6ZUL3 223 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 ZNF329Q86UD4 541 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 ZNF695Q8IW36 515 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 FOXRED2Q8IWF2 684 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 TOMM40LQ969M1 308 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 GON7Q9BXV9 100 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 FAM53CQ9NYF3 392 aa12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 WARS2Q9UGM6 360 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-215ENST00000568676 LOC107986453A0A1B0GWG9 222 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 SERPINE3A8MV23 424 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 GLIPR1P48060 266 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 AESQ08117 197 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 PDZK1IP1Q13113 114 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 RBM39Q14498 530 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 KRBOX4Q5JUW0 171 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 BAIAP2L2Q6UXY1 529 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 TCEANCQ8N8B7 351 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 C5orf56Q8N8D9 126 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 NEK6Q9HC98 313 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 ENOPH1Q9UHY7 261 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 GSTK1Q9Y2Q3 226 aa12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 LSM4Q9Y4Z0 139 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-215ENST00000568676 KBTBD11-OT1A0A1B0GTJ5 212 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 KDM4BO94953 1096 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 IGHG2P01859 326 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 SNRNP70P08621 437 aaKnown RBP12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 OCM2P0CE71 109 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 OCMP0CE72 109 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 TMEM11P17152 192 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 ATF1P18846 271 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 RAB7AP51149 207 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 MADCAM1Q13477 382 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 C9orf66Q5T8R8 295 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 TMEM244Q5VVB8 128 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 TEX38Q6PEX7 206 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 FAM220AQ7Z4H9 259 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 BCDIN3DQ7Z5W3 292 aaKnown RBP12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 SLC35E3Q7Z769 313 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 SAXO1Q8IYX7 474 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 OR8H3Q8N146 312 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 ZNF565Q8N9K5 539 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 OR8U1Q8NH10 309 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 HAVCR2Q8TDQ0 301 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 TFAP2CQ92754 450 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 HRASLS5Q96KN8 279 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 NCOR1P1Q9H4R4 102 aa12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 SIRT4Q9Y6E7 314 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-215ENST00000568676 IGKV1-9A0A0C4DH69 117 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 A0A1W2PQL4 384 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 FAM172BPA6NC97 362 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 CCL24O00175 119 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 FKBP6O75344 327 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 ZNF44P15621 663 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 GDNFP39905 211 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 DAPP51397 102 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 SNU13P55769 128 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 BNIP1Q12981 228 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 TMED1Q13445 227 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 HES1Q14469 280 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 C17orf58Q2M2W7 97 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 C12orf73Q69YU5 71 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 SLC16A12Q6ZSM3 486 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 SSX6Q7RTT6 188 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 STPG2Q8N412 459 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 CCDC197Q8NCU1 140 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 OR5M8Q8NGP6 311 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 OR56B4Q8NH76 319 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 KIRREL1Q96J84 757 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 OPALINQ96PE5 141 aa12.43□□□□□ -0.42
HERPUD1-215ENST00000568676 ZAR1LA6NP61 321 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 H3BSH0 61 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 J3QR06 171 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 MT-ND2P03891 347 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 ISG15P05161 165 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 ZNF20P17024 532 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 C21orf33P30042 268 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 HTR1FP30939 366 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 PRSS35Q8N3Z0 413 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 ADAT3Q96EY9 351 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 COQ2Q96H96 371 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 NOL4LQ96MY1 436 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 TBX5Q99593 518 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 THTPAQ9BU02 230 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 LINC00574Q9H8X3 128 aa12.42□□□□□ -0.42
HERPUD1-215ENST00000568676 A0A1W2PPI3 338 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 AP4M1O00189 453 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 SLC33A1O00400 549 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 DBTP11182 482 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 NFYBP25208 207 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 ATP6V1E1P36543 226 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 ISL1P61371 349 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 FLOT2Q14254 428 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 KIR2DS1Q14954 304 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms