RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ABCA11PQ4W5N1 156 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 SEM1Q6ZVN7 128 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 ZNF610Q8N9Z0 462 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 NEK7Q8TDX7 302 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 STARD4Q96DR4 205 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 RNF126Q9BV68 326 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 RHOFQ9HBH0 211 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 DSPP15924 2871 aaKnown RBP15.46■□□□□ 0.07
SMPD3-211ENST00000568373 CGAP01215 116 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 SELEP16581 610 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 UBA52P62987 128 aaKnown RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 PSG7Q13046 419 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 IGFBP7Q16270 282 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 IGSF11Q5DX21 431 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 WDR86Q86TI4 376 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 CXorf67Q86X51 503 aaPredicted RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 SLC38A6Q8IZM9 456 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 C17orf78Q8N4C9 275 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 SUMF2Q8NBJ7 301 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 POC1AQ8NBT0 407 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 GTF3AQ92664 365 aaKnown RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 ADAT1Q9BUB4 502 aaKnown RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 OPN3Q9H1Y3 402 aaPredicted RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 AADACP22760 399 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 HERV-K104P61576 105 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 ALKBH6Q3KRA9 238 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 BEX5Q5H9J7 111 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 COMMD7Q86VX2 200 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 RBMXL3Q8N7X1 1067 aaKnown RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 KLF14Q8TD94 323 aaPredicted RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 RTN4IP1Q8WWV3 396 aaPredicted RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 ST8SIA2Q92186 375 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 DCUN1D4Q92564 292 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 GALNT14Q96FL9 552 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 NAA60Q9H7X0 242 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 ZNF71Q9NQZ8 489 aaPredicted RBP15.45■□□□□ 0.06
SMPD3-211ENST00000568373 SLC2A9Q9NRM0 540 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 KCNIP3Q9Y2W7 256 aa15.45■□□□□ 0.06
SMPD3-211ENST00000568373 DMXL2Q8TDJ6 3036 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 PRR14LQ5THK1 2151 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 H0YIZ8 118 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 PPYP01298 95 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 RRASP10301 218 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 IL15RAQ13261 267 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 RBM39Q14498 530 aaKnown RBP15.44■□□□□ 0.06
SMPD3-211ENST00000568373 P2RY6Q15077 328 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 RIMS4Q9H426 269 aaPredicted RBP15.44■□□□□ 0.06
SMPD3-211ENST00000568373 IFT22Q9H7X7 185 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 TRAV24A0A0B4J272 114 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 RLN2P04090 185 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 GLAP06280 429 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 NMBP08949 121 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 SCCPDHQ8NBX0 429 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 OR5T2Q8NGG2 359 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 RSRP1Q9BUV0 290 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 OBP2BQ9NPH6 170 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 POLDIP2Q9Y2S7 368 aa15.44■□□□□ 0.06
SMPD3-211ENST00000568373 KIR2DS1A0A191URI9 304 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 K7EM74 188 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 IGLV1-44P01699 117 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 CECR9P0C854 216 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 LYL1P12980 280 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 MPV17P39210 176 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 KIR2DS4P43632 304 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 KIR2DS1Q14954 304 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 PHLDA2Q53GA4 152 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 PRSS54Q6PEW0 395 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 UNQ6126/PRO20091Q6UXV3 157 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 Q8IYB0 196 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 MEMO1Q9Y316 297 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 ATP23Q9Y6H3 246 aa15.43■□□□□ 0.06
SMPD3-211ENST00000568373 CEP295Q9C0D2 2601 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 TRDCB7Z8K6 153 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 HS3ST1O14792 307 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 KCNAB3O43448 404 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 TK1P04183 234 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 SCTP09683 121 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 OR5AC1P0C628 307 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 ZNF154Q13106 437 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 TMEM187Q14656 261 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 BEND4Q6ZU67 534 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 RDH5Q92781 318 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 SYT3Q9BQG1 590 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 TRBV6-6A0A0A6YYG2 114 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 C3orf80F5H4A9 247 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 CRYABP02511 175 aaKnown RBP15.42■□□□□ 0.06
SMPD3-211ENST00000568373 PET100P0DJ07 73 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 LUMP51884 338 aaPredicted RBP15.42■□□□□ 0.06
SMPD3-211ENST00000568373 ERVK11-1P61568 191 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 RAB32Q13637 225 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 OR8G1Q15617 311 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 BHLHA15Q7RTS1 189 aaPredicted RBP15.42■□□□□ 0.06
SMPD3-211ENST00000568373 MRPL30Q8TCC3 161 aaKnown RBP15.42■□□□□ 0.06
SMPD3-211ENST00000568373 ZNF471Q9BX82 626 aaPredicted RBP15.42■□□□□ 0.06
SMPD3-211ENST00000568373 SUCNR1Q9BXA5 334 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 RASL12Q9NYN1 266 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 GSKIPQ9P0R6 139 aa15.42■□□□□ 0.06
SMPD3-211ENST00000568373 TMEM210A6NLX4 147 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 IFNA21P01568 189 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 TUBG1P23258 451 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms