RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, human

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-215	ENST00000566843	AADAC	P22760	399 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	CEBPG	P53567	150 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	TAS2R60	P59551	318 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	REL	Q04864	619 aa	Predicted RBP	13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	OR8B8	Q15620	311 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	EXT1	Q16394	746 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843		Q6ZS52	159 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	DYRK2	Q92630	601 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	SPIN2A	Q99865	258 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	SPIN2B	Q9BPZ2	258 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	TGIF2	Q9GZN2	237 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	PLSCR2	Q9NRY7	297 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	PPP1R14D	Q9NXH3	145 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	CLEC18A	A5D8T8	446 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	ARGFX	A6NJG6	315 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	TSTD3	H0UI37	97 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	MKRN2OS	H3BPM6	223 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843		M0R135	149 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	SPRY1	O43609	319 aa	Predicted RBP	13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	CLDN17	P56750	224 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	HERV-K104	P61576	105 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	TLE4	Q04727	773 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	BAX	Q07812	192 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	MEX3B	Q6ZN04	569 aa	Known RBP	13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	SHISA6	Q6ZSJ9	500 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	ANKRD37	Q7Z713	158 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	CLEC18C	Q8NCF0	446 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	OR2M3	Q8NG83	312 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	OR5C1	Q8NGR4	320 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	ZNF799	Q96GE5	643 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	MEGF10	Q96KG7	1140 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	CALHM2	Q9HA72	323 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	SLC7A11	Q9UPY5	501 aa		13.57	□□□□□ -0.24
COMMD4-215	ENST00000566843	ONECUT2	O95948	504 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	FABP4	P15090	132 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	EPHA1	P21709	976 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	NOVA1	P51513	510 aa	Known RBP	13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	DYNLT3	P51808	116 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	FOXL2	P58012	376 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	RPL23A	P62750	156 aa	Known RBP	13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	PHYHD1	Q5SRE7	291 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	AKR1C8P	Q5T2L2	129 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	C20orf196	Q8IYI0	205 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	C1orf87	Q8N0U7	546 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	MAFA	Q8NHW3	353 aa	Predicted RBP	13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	SEMA5B	Q9P283	1151 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	RALGAPA1	Q6GYQ0	2036 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843		A0A087X0M5	115 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843		A0A1B0GX30	115 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	GUCA1A	P43080	201 aa	Predicted RBP	13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	CFHR1	Q03591	330 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	PNRC1	Q12796	327 aa	Predicted RBP	13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	CHAF1B	Q13112	559 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	SNAI3	Q3KNW1	292 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	LBH	Q53QV2	105 aa	Predicted RBP	13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	PDZD11	Q5EBL8	140 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	UNQ6494/PRO21346	Q6UXR6	183 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843		Q6ZPA2	131 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	SELENOH	Q8IZQ5	122 aa	Known RBP	13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	C2orf88	Q9BSF0	95 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	DKKL1	Q9UK85	242 aa		13.56	□□□□□ -0.24
COMMD4-215	ENST00000566843	PPY	P01298	95 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	OMG	P23515	440 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	VAMP2	P63027	116 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	ID3	Q02535	119 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	CNN3	Q15417	329 aa	Known RBP	13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	SHB	Q15464	509 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	FAM90A2P	Q658T7	463 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	TMEM211	Q6ICI0	200 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	DPPA2	Q7Z7J5	298 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	IL36G	Q9NZH8	169 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	TRBV24-1	A0A075B6N3	115 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	TRBV11-1	A0A0K0K1C0	115 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	DUXB	A0A1W2PPF3	345 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	GEMIN2	O14893	280 aa	Known RBP	13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	SSSCA1	O60232	199 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	FKBP2	P26885	142 aa	Known RBP	13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	CEACAM6	P40199	344 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	CD200	P41217	278 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	OR1D5	P58170	312 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	TAS2R30	P59541	319 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	DEFB133	Q30KQ1	61 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	LHFPL2	Q6ZUX7	228 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	CMTM1	Q8IZ96	169 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	RNASE11	Q8TAA1	199 aa	Known RBP	13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	SPTSSA	Q969W0	71 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	PACRG	Q96M98	296 aa	Predicted RBP	13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	SIGLEC12	Q96PQ1	595 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	HIST1H2BL	Q99880	126 aa		13.55	□□□□□ -0.24
COMMD4-215	ENST00000566843	IGLV3-12	A0A075B6K2	115 aa		13.54	□□□□□ -0.24
COMMD4-215	ENST00000566843	IGKV1-12	A0A0C4DH73	117 aa		13.54	□□□□□ -0.24
COMMD4-215	ENST00000566843		A0A1B0GU03	582 aa		13.54	□□□□□ -0.24
COMMD4-215	ENST00000566843	FAM221A	A4D161	298 aa		13.54	□□□□□ -0.24
COMMD4-215	ENST00000566843	CLDN34	H7C241	214 aa		13.54	□□□□□ -0.24
COMMD4-215	ENST00000566843	TMEM50A	O95807	157 aa		13.54	□□□□□ -0.24
COMMD4-215	ENST00000566843	CYB5R3	P00387	301 aa	Predicted RBP	13.54	□□□□□ -0.24
COMMD4-215	ENST00000566843	IGKV1D-12	P01611	117 aa		13.54	□□□□□ -0.24
COMMD4-215	ENST00000566843	CD63	P08962	238 aa		13.54	□□□□□ -0.24

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