RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 PCDHB16Q9NRJ7 776 aa11.24□□□□□ -0.61
SPG7-215ENST00000566682 NDUFB11Q9NX14 153 aa11.24□□□□□ -0.61
SPG7-215ENST00000566682 ST3GAL6Q9Y274 331 aa11.24□□□□□ -0.61
SPG7-215ENST00000566682 SOX21Q9Y651 276 aaPredicted RBP11.24□□□□□ -0.61
SPG7-215ENST00000566682 MXRA5Q9NR99 2828 aa11.24□□□□□ -0.61
SPG7-215ENST00000566682 A0A1W2PP11 408 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 A0A1W2PPH5 198 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 MEX3AA1L020 520 aaKnown RBP11.23□□□□□ -0.61
SPG7-215ENST00000566682 SLC33A1O00400 549 aaPredicted RBP11.23□□□□□ -0.61
SPG7-215ENST00000566682 CCRL2O00421 344 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 MGST3O14880 152 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 TCF21O43680 179 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 ARL6IP5O75915 188 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 CCL3L1P16619 93 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 PSMB9P28065 219 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 DLX1P56177 255 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 BPIFB3P59826 476 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 SRSF2Q01130 221 aaKnown RBP11.23□□□□□ -0.61
SPG7-215ENST00000566682 PRB3Q04118 309 aaPredicted RBP11.23□□□□□ -0.61
SPG7-215ENST00000566682 GLT8D1Q68CQ7 371 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 PDZD9Q8IXQ8 264 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 C11orf42Q8N5U0 333 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 CHST4Q8NCG5 386 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
SPG7-215ENST00000566682 FOXRED1Q96CU9 486 aaPredicted RBP11.23□□□□□ -0.61
SPG7-215ENST00000566682 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
SPG7-215ENST00000566682 SLITRK2Q9H156 845 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 PPA2Q9H2U2 334 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 KIAA2026Q5HYC2 2103 aa11.23□□□□□ -0.61
SPG7-215ENST00000566682 TRAV24A0A0B4J272 114 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 CD37P11049 281 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 GTF2F2P13984 249 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 PRTN3P24158 256 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 CALRP27797 417 aaKnown RBP11.22□□□□□ -0.61
SPG7-215ENST00000566682 ERP29P30040 261 aaKnown RBP11.22□□□□□ -0.61
SPG7-215ENST00000566682 RBM11P57052 281 aaKnown RBP11.22□□□□□ -0.61
SPG7-215ENST00000566682 ERVFRD-1P60508 538 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 MEF2CQ06413 473 aaPredicted RBP11.22□□□□□ -0.61
SPG7-215ENST00000566682 AESQ08117 197 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 NHLRC3Q5JS37 347 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 C1orf100Q5SVJ3 147 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 LCE2CQ5TA81 110 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 RUSC1-AS1Q66K80 236 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 CD200R1LQ6Q8B3 271 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 METAP1DQ6UB28 335 aaPredicted RBP11.22□□□□□ -0.61
SPG7-215ENST00000566682 C9orf139Q6ZV77 190 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 USP43Q70EL4 1123 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 TNFRSF14Q92956 283 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 SUCNR1Q9BXA5 334 aa11.22□□□□□ -0.61
SPG7-215ENST00000566682 METTL8Q9H825 291 aaKnown RBP11.22□□□□□ -0.61
SPG7-215ENST00000566682 UNKLQ9H9P5 680 aaKnown RBP11.22□□□□□ -0.61
SPG7-215ENST00000566682 AK6Q9Y3D8 172 aaKnown RBP11.22□□□□□ -0.61
SPG7-215ENST00000566682 A0A0A6YYJ9 748 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 IGHV1-69DA0A0B4J2H0 117 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 TRDV1A0A1B0GX56 115 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 hADV38S2A0JD32 116 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 RNASEK-C17orf49H0YIS7 233 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 HSPB6O14558 160 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.61
SPG7-215ENST00000566682 VENTXO95231 258 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 TNFAIP8O95379 198 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 IGHV1-69P01742 117 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 CSN2P05814 226 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 GLIPR1P48060 266 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 DLX6P56179 175 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 P2RX3P56373 397 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 KLRD1Q13241 179 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 PAN3Q58A45 887 aaKnown RBP11.21□□□□□ -0.61
SPG7-215ENST00000566682 SYT6Q5T7P8 510 aaPredicted RBP11.21□□□□□ -0.61
SPG7-215ENST00000566682 TCF23Q7RTU1 214 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 SIGLECL1Q8N7X8 197 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 MRPS24Q96EL2 167 aaKnown RBP11.21□□□□□ -0.61
SPG7-215ENST00000566682 ZNF48Q96MX3 618 aaPredicted RBP11.21□□□□□ -0.61
SPG7-215ENST00000566682 GFI1Q99684 422 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 BANF2Q9H503 90 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 ING3Q9NXR8 418 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 ZNF581Q9P0T4 197 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 GHRLQ9UBU3 117 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 LINC00312Q9Y6C7 94 aa11.21□□□□□ -0.61
SPG7-215ENST00000566682 hCG_1809904A0A1W2PP81 198 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 A0A1W2PPE2 198 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 A0A1W2PR64 198 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 A0A1W2PRV1 198 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 FUOMA2VDF0 154 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 C17orf98A8MV24 154 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 OR7C1O76099 320 aaPredicted RBP11.2□□□□□ -0.62
SPG7-215ENST00000566682 ZNF728P0DKX0 622 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 GALP22466 123 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 HTR2CP28335 458 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 HILS1P60008 231 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 ATXN7L3Q14CW9 347 aaPredicted RBP11.2□□□□□ -0.62
SPG7-215ENST00000566682 NEDD8Q15843 81 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 TAF9Q16594 264 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 MPV17LQ2QL34 196 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 KRBOX4Q5JUW0 171 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 LINC00596Q86U02 117 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 SUMF2Q8NBJ7 301 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 TMEM104Q8NE00 496 aa11.2□□□□□ -0.62
SPG7-215ENST00000566682 COQ2Q96H96 371 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms