RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 GLAP06280 429 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 CELA3AP09093 270 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 SEC11BP0C7V7 166 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 GLI4P10075 376 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 BCL3P20749 454 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
HERC2-207ENST00000564734 CLDN18P56856 261 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 SAXO1Q8IYX7 474 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 CCDC71LQ8N9Z2 235 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 OR56B2PQ8NGI1 322 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 THOC3Q96J01 351 aaKnown RBP13.11□□□□□ -0.31
HERC2-207ENST00000564734 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 ZPBPQ9BS86 351 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 ZFP57Q9NU63 452 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 PIEZO1Q92508 2521 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 PCNX2A6NKB5 2137 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 H7C2Y5 167 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 PHF1O43189 567 aaPredicted RBP13.11□□□□□ -0.31
HERC2-207ENST00000564734 OR7C1O76099 320 aaPredicted RBP13.11□□□□□ -0.31
HERC2-207ENST00000564734 DANCRP0C864 163 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 NOVA1P51513 510 aaKnown RBP13.11□□□□□ -0.31
HERC2-207ENST00000564734 SIGLEC12Q96PQ1 595 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 TAAR9Q96RI9 348 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 FAM173AQ9BQD7 235 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 PRRG4Q9BZD6 226 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 TMED3Q9Y3Q3 217 aa13.11□□□□□ -0.31
HERC2-207ENST00000564734 SPTBN4Q9H254 2564 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 ZNF503-AS2A6NEH8 195 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 MPPED1O15442 326 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 SPP1P10451 314 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
HERC2-207ENST00000564734 NFYBP25208 207 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 LMO1P25800 156 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 FOXG1P55316 489 aaPredicted RBP13.1□□□□□ -0.31
HERC2-207ENST00000564734 BATF2Q8N1L9 274 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 SLC35G3Q8N808 338 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 EXTL1Q92935 676 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 USB1Q9BQ65 265 aaKnown RBP13.1□□□□□ -0.31
HERC2-207ENST00000564734 Q9N2K0 584 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 C3orf85A0A1B0GTC6 90 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 NAPSAO96009 420 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 COX5BP10606 129 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 GNRHRP30968 328 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 CD80P33681 288 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 HERV-K104P61576 105 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 PRDX4Q13162 271 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 KIRREL1Q96J84 757 aa13.1□□□□□ -0.31
HERC2-207ENST00000564734 FAM212BQ9NTI7 297 aaPredicted RBP13.1□□□□□ -0.31
HERC2-207ENST00000564734 AGPAT2O15120 278 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 ZNHIT1O43257 154 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 FBXW12Q6X9E4 464 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 TUSC5Q8IXB3 177 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 DDA1Q9BW61 102 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 FBXO9Q9UK97 447 aaPredicted RBP13.09□□□□□ -0.31
HERC2-207ENST00000564734 TRDCB7Z8K6 153 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 C9orf172C9J069 976 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 FGF12P61328 243 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 RAB11FIP2Q7L804 512 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 C5orf24Q7Z6I8 188 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 IQCF2Q8IXL9 164 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 FAM185AQ8N0U4 392 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 SLAMF9Q96A28 289 aa13.09□□□□□ -0.31
HERC2-207ENST00000564734 PAPOLGQ9BWT3 736 aaKnown RBP13.09□□□□□ -0.31
HERC2-207ENST00000564734 RCL1Q9Y2P8 373 aaKnown RBP13.09□□□□□ -0.31
HERC2-207ENST00000564734 A0A096LPE4 126 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 A0A1W2PPZ6 126 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 PRSS44E7EML9 344 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 SNCAP37840 140 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 RFC3P40938 356 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 RND3P61587 244 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 SRYQ05066 204 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 CEACAM21Q3KPI0 293 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 TMEM56Q96MV1 263 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 CACFD1Q9UGQ2 172 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 TMEM56-RWDD3S4R434 201 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 KMT2EQ8IZD2 1858 aa13.08□□□□□ -0.31
HERC2-207ENST00000564734 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 HLA-HP01893 362 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 NHLH2Q02577 135 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 HES7Q9BYE0 225 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 MTCH1Q9NZJ7 389 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 CCL2P13500 99 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 SWI5Q1ZZU3 235 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 C9orf135Q5VTT2 229 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 SUMF1Q8NBK3 374 aa13.08□□□□□ -0.32
HERC2-207ENST00000564734 MEX3AA1L020 520 aaKnown RBP13.07□□□□□ -0.32
HERC2-207ENST00000564734 HAAOP46952 286 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 GPM6AP51674 278 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 HERPUD1Q15011 391 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 FAM76BQ5HYJ3 339 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 DPPA2Q7Z7J5 298 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 LINC00518Q8N0U6 118 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 COMMD1Q8N668 190 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
HERC2-207ENST00000564734 A0A1W2PNU3 283 aaPredicted RBP13.07□□□□□ -0.32
HERC2-207ENST00000564734 C5orf49A4QMS7 147 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 NKX2-6A6NCS4 301 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 TUSC2O75896 110 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms