RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 S100ZQ8WXG8 99 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 FAM168AQ92567 244 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 TSC22D3Q99576 134 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 DNTTIP1Q9H147 329 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 IFT22Q9H7X7 185 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 TMEM165Q9HC07 324 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 HIVEP2P31629 2446 aa14.17□□□□□ -0.14
CMTM3-208ENST00000564247 ANK3Q12955 4377 aaKnown RBP14.17□□□□□ -0.14
CMTM3-208ENST00000564247 ABCA1O95477 2261 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 FN1P02751 2386 aaKnown RBP14.16□□□□□ -0.14
CMTM3-208ENST00000564247 ISPDA4D126 451 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 NKX6-3A6NJ46 265 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 MCRIP1C9JLW8 97 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 SIRPB1O00241 398 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 OR2H2O95918 312 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 GYPAP02724 150 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 GLAP06280 429 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 RBMXP38159 391 aaKnown RBP14.16□□□□□ -0.14
CMTM3-208ENST00000564247 NR4A2P43354 598 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 TMEM50BP56557 158 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 IL18Q14116 193 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 MOGAT2Q3SYC2 334 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 CDNFQ49AH0 187 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 ATPAF1Q5TC12 328 aaPredicted RBP14.16□□□□□ -0.14
CMTM3-208ENST00000564247 MAPK1IP1LQ8NDC0 245 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 ANGPTL6Q8NI99 470 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 C10orf105Q8TEF2 133 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 MED30Q96HR3 178 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 ZNF665Q9H7R5 613 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 HSF4Q9ULV5 492 aa14.16□□□□□ -0.14
CMTM3-208ENST00000564247 YLPM1P49750 1951 aaKnown RBP14.16□□□□□ -0.14
CMTM3-208ENST00000564247 IGKV1D-17A0A075B6S4 117 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 A0A096LNT2 108 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 NDUFS8O00217 210 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 LMO1P25800 156 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 PTBP1P26599 531 aaKnown RBP eCLIP14.15□□□□□ -0.14
CMTM3-208ENST00000564247 ETV6P41212 452 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 TAS2R20P59543 309 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 ZNF45Q02386 682 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 COL10A1Q03692 680 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 KRTAP1-1Q07627 177 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 LSAMPQ13449 338 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 ZMYND11Q15326 602 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 PAN3Q58A45 887 aaKnown RBP14.15□□□□□ -0.14
CMTM3-208ENST00000564247 STUMQ69YW2 141 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 PYHIN1Q6K0P9 492 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 SLC36A1Q7Z2H8 476 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 IZUMO1Q8IYV9 350 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 ZNF561Q8N587 486 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 SUMF2Q8NBJ7 301 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 NEK7Q8TDX7 302 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 ARHGAP5-AS1Q96IT6 56 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 PECRQ9BY49 303 aa14.15□□□□□ -0.14
CMTM3-208ENST00000564247 NAV3Q8IVL0 2385 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 FOXI3A8MTJ6 420 aaPredicted RBP14.14□□□□□ -0.15
CMTM3-208ENST00000564247 IGHV2-70P01814 119 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 GSTP1P09211 210 aaKnown RBP14.14□□□□□ -0.15
CMTM3-208ENST00000564247 HIST1H1DP16402 221 aaKnown RBP14.14□□□□□ -0.15
CMTM3-208ENST00000564247 GIFP27352 417 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 CHATP28329 748 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 CEBPDP49716 269 aaPredicted RBP14.14□□□□□ -0.15
CMTM3-208ENST00000564247 MRPS15P82914 257 aaKnown RBP14.14□□□□□ -0.15
CMTM3-208ENST00000564247 LOXL1Q08397 574 aaPredicted RBP14.14□□□□□ -0.15
CMTM3-208ENST00000564247 PNLIPRP3Q17RR3 467 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 TMEM155Q4W5P6 130 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 AVPI1Q5T686 147 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 SIGIRRQ6IA17 410 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 DCDC5Q6ZRR9 648 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 C6orf201Q7Z4U5 140 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 SPICQ8N5J4 248 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 CD177Q8N6Q3 437 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 ASCC1Q8N9N2 400 aaKnown RBP14.14□□□□□ -0.15
CMTM3-208ENST00000564247 OR5D13Q8NGL4 314 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 SDSLQ96GA7 329 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 SNX22Q96L94 193 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 CCL13Q99616 98 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 TMEM246Q9BRR3 403 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 PIMREGQ9BSJ6 248 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 FAAP24Q9BTP7 215 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 DPCDQ9BVM2 203 aaPredicted RBP14.14□□□□□ -0.15
CMTM3-208ENST00000564247 ZNF222Q9UK12 451 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 PCDHB10Q9UN67 800 aa14.14□□□□□ -0.15
CMTM3-208ENST00000564247 TRAV24A0A0B4J272 114 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 SERPINE3A8MV23 424 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 SLC33A1O00400 549 aaPredicted RBP14.13□□□□□ -0.15
CMTM3-208ENST00000564247 TMPRSS2O15393 492 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 ADAM20O43506 726 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 GNB3P16520 340 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 KCNJ3P48549 501 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 IL13RA1P78552 427 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 MADCAM1Q13477 382 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 ARFRP1Q13795 201 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 ZNF846Q147U1 533 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 ZNF260Q3ZCT1 412 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 PLAC9Q5JTB6 97 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 ZNF788Q6ZQV5 615 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 SNX29P2Q8IUI4 249 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 SOSTQ9BQB4 213 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 AUNIPQ9H7T9 357 aa14.13□□□□□ -0.15
CMTM3-208ENST00000564247 ZMAT3Q9HA38 289 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms