RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 RIPK1Q13546 671 aa24.98■■□□□ 1.59
CMTM4-204ENST00000563952 C6orf141Q5SZD1 244 aa24.98■■□□□ 1.59
CMTM4-204ENST00000563952 ELP2Q6IA86 826 aa24.98■■□□□ 1.59
CMTM4-204ENST00000563952 NANOGP1Q8N7R0 232 aa24.98■■□□□ 1.59
CMTM4-204ENST00000563952 CKLFQ9UBR5 152 aa24.98■■□□□ 1.59
CMTM4-204ENST00000563952 ING4Q9UNL4 249 aa24.98■■□□□ 1.59
CMTM4-204ENST00000563952 ERGIC3Q9Y282 383 aa24.98■■□□□ 1.59
CMTM4-204ENST00000563952 MMP24Q9Y5R2 645 aa24.98■■□□□ 1.59
CMTM4-204ENST00000563952 FUOMA2VDF0 154 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 PTGES3LE9PB15 166 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 H0YJX3 145 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 CDRT1O95170 752 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 HTR3BO95264 441 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 PTGFRP43088 359 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 GLIPR1P48060 266 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 DYNC1I2Q13409 638 aaKnown RBP24.97■■□□□ 1.59
CMTM4-204ENST00000563952 DOC2BQ14184 412 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 DHRS7BQ6IAN0 325 aaPredicted RBP24.97■■□□□ 1.59
CMTM4-204ENST00000563952 LHFPL4Q7Z7J7 247 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 OR14A2Q96R54 314 aa24.97■■□□□ 1.59
CMTM4-204ENST00000563952 UBE2J1Q9Y385 318 aaPredicted RBP24.97■■□□□ 1.59
CMTM4-204ENST00000563952 TRGV10A0A0A0MS01 117 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 A0A1B0GUS0 222 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 A0A1W2PPK0 400 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 HSPB6O14558 160 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 CDK1P06493 297 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 CELP19835 753 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 ATXN7L3Q14CW9 347 aaPredicted RBP24.96■■□□□ 1.59
CMTM4-204ENST00000563952 LRRC75BQ2VPJ9 315 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 MEGF9Q9H1U4 602 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 SESN1Q9Y6P5 492 aa24.96■■□□□ 1.59
CMTM4-204ENST00000563952 CLPXO76031 633 aa24.95■■□□□ 1.58
CMTM4-204ENST00000563952 IGFBP3P17936 291 aaPredicted RBP24.95■■□□□ 1.58
CMTM4-204ENST00000563952 LY6EQ16553 131 aa24.95■■□□□ 1.58
CMTM4-204ENST00000563952 PIGYQ3MUY2 71 aa24.95■■□□□ 1.58
CMTM4-204ENST00000563952 KRBOX4Q5JUW0 171 aa24.95■■□□□ 1.58
CMTM4-204ENST00000563952 ASCL4Q6XD76 172 aa24.95■■□□□ 1.58
CMTM4-204ENST00000563952 ZNF184Q99676 751 aaPredicted RBP24.95■■□□□ 1.58
CMTM4-204ENST00000563952 SCN3BQ9NY72 215 aa24.95■■□□□ 1.58
CMTM4-204ENST00000563952 TRAV8-7A0A075B6U6 113 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 MAGEA13PA6NCF6 341 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 ODF3BA8MYP8 253 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 PLA1AQ53H76 456 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 OLFML2AQ68BL7 652 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 OR11H6Q8NGC7 330 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 SGMS2Q8NHU3 365 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 MYDGFQ969H8 173 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 COQ2Q96H96 371 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 S100A13Q99584 98 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 METTL9Q9H1A3 318 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 GAL3ST2Q9H3Q3 398 aa24.94■■□□□ 1.58
CMTM4-204ENST00000563952 TRBV5-7A0A0A0MS05 114 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 ODAMA1E959 279 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 CLPSL1A2RUU4 121 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 MMP23AO75900 390 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 CSN2P05814 226 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 PAN3Q58A45 887 aaKnown RBP24.93■■□□□ 1.58
CMTM4-204ENST00000563952 PRAMEF5Q5TYX0 476 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 ZNF626Q68DY1 528 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 OR51T1Q8NGJ9 327 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 MND1Q9BWT6 205 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 TMEM133Q9H2Q1 129 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 VCX3BQ9H321 246 aa24.93■■□□□ 1.58
CMTM4-204ENST00000563952 TBL2Q9Y4P3 447 aaKnown RBP24.93■■□□□ 1.58
CMTM4-204ENST00000563952 FAM90A8PA6NJQ4 464 aa24.92■■□□□ 1.58
CMTM4-204ENST00000563952 H0YHG0 523 aa24.92■■□□□ 1.58
CMTM4-204ENST00000563952 FSTP19883 344 aa24.92■■□□□ 1.58
CMTM4-204ENST00000563952 TGFBR2P37173 567 aa24.92■■□□□ 1.58
CMTM4-204ENST00000563952 IL13RA2Q14627 380 aa24.92■■□□□ 1.58
CMTM4-204ENST00000563952 DYNAPQ8N1N2 210 aa24.92■■□□□ 1.58
CMTM4-204ENST00000563952 SGCDQ92629 289 aa24.92■■□□□ 1.58
CMTM4-204ENST00000563952 SLITRK2Q9H156 845 aa24.92■■□□□ 1.58
CMTM4-204ENST00000563952 PPIL3Q9H2H8 161 aaKnown RBP24.92■■□□□ 1.58
CMTM4-204ENST00000563952 IGHV2-26A0A0B4J1V2 119 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 TRAV24A0A0B4J272 114 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 GPX5O75715 221 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 CSTBP04080 98 aaKnown RBP24.91■■□□□ 1.58
CMTM4-204ENST00000563952 SERPINA2P20848 420 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 AANATQ16613 207 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 Q6ZSV7 163 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 Q8NFD4 153 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 LINC01006Q8NI28 216 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 WFDC12Q8WWY7 111 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 CORO2AQ92828 525 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 DERL3Q96Q80 235 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 PAK1IP1Q9NWT1 392 aaPredicted RBP24.91■■□□□ 1.58
CMTM4-204ENST00000563952 TAS2R3Q9NYW6 316 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 IL36GQ9NZH8 169 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 RNF114Q9Y508 228 aa24.91■■□□□ 1.58
CMTM4-204ENST00000563952 CD1AP06126 327 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 CDK2P24941 298 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 SSX2Q16385 188 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 KIAA2026Q5HYC2 2103 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 RNLSQ5VYX0 342 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 OSR2Q8N2R0 312 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 JAGN1Q8N5M9 183 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 FOXRED1Q96CU9 486 aaPredicted RBP24.9■■□□□ 1.58
CMTM4-204ENST00000563952 CDCA4Q9BXL8 241 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 CLEC7AQ9BXN2 247 aa24.9■■□□□ 1.58
CMTM4-204ENST00000563952 ST3GAL6Q9Y274 331 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms