RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 GOLGB1Q14789 3259 aaKnown RBP4□□□□□ -1.77
SMG1-207ENST00000563235 AFDNP55196 1824 aaKnown RBP4□□□□□ -1.77
SMG1-207ENST00000563235 FAM236DA0A1B0GTK5 79 aa4□□□□□ -1.77
SMG1-207ENST00000563235 SMCHD1A6NHR9 2005 aa4□□□□□ -1.77
SMG1-207ENST00000563235 EEDO75530 441 aaKnown RBP4□□□□□ -1.77
SMG1-207ENST00000563235 LYPD3O95274 346 aa4□□□□□ -1.77
SMG1-207ENST00000563235 ZSCAN5DPP0CG00 497 aa4□□□□□ -1.77
SMG1-207ENST00000563235 FAM236CP0DP71 79 aa4□□□□□ -1.77
SMG1-207ENST00000563235 PRTN3P24158 256 aa4□□□□□ -1.77
SMG1-207ENST00000563235 CHATP28329 748 aa4□□□□□ -1.77
SMG1-207ENST00000563235 ETV6P41212 452 aa4□□□□□ -1.77
SMG1-207ENST00000563235 LIM2P55344 173 aa4□□□□□ -1.77
SMG1-207ENST00000563235 ACOT6Q3I5F7 207 aaPredicted RBP4□□□□□ -1.77
SMG1-207ENST00000563235 KDM4DQ6B0I6 523 aa4□□□□□ -1.77
SMG1-207ENST00000563235 XAF1Q6GPH4 301 aa4□□□□□ -1.77
SMG1-207ENST00000563235 SPSB3Q6PJ21 355 aa4□□□□□ -1.77
SMG1-207ENST00000563235 IGFL2Q6UWQ7 119 aa4□□□□□ -1.77
SMG1-207ENST00000563235 CBR4Q8N4T8 237 aa4□□□□□ -1.77
SMG1-207ENST00000563235 RDH5Q92781 318 aa4□□□□□ -1.77
SMG1-207ENST00000563235 TADA1Q96BN2 335 aa4□□□□□ -1.77
SMG1-207ENST00000563235 TBX15Q96SF7 602 aa4□□□□□ -1.77
SMG1-207ENST00000563235 NDFIP1Q9BT67 221 aa4□□□□□ -1.77
SMG1-207ENST00000563235 EFCAB1Q9HAE3 211 aa4□□□□□ -1.77
SMG1-207ENST00000563235 GALPQ9UBC7 116 aa4□□□□□ -1.77
SMG1-207ENST00000563235 LSM5Q9Y4Y9 91 aaKnown RBP4□□□□□ -1.77
SMG1-207ENST00000563235 ZNF780BQ9Y6R6 833 aa4□□□□□ -1.77
SMG1-207ENST00000563235 ARAP2Q8WZ64 1704 aa4□□□□□ -1.77
SMG1-207ENST00000563235 OR5B21A6NL26 309 aa4□□□□□ -1.77
SMG1-207ENST00000563235 MPTX1A8MV57 137 aa4□□□□□ -1.77
SMG1-207ENST00000563235 IGKV5-2P06315 115 aa4□□□□□ -1.77
SMG1-207ENST00000563235 FGF7P21781 194 aa4□□□□□ -1.77
SMG1-207ENST00000563235 CD34P28906 385 aa4□□□□□ -1.77
SMG1-207ENST00000563235 HRH1P35367 487 aa4□□□□□ -1.77
SMG1-207ENST00000563235 GGT2P36268 569 aa4□□□□□ -1.77
SMG1-207ENST00000563235 CTF1Q16619 201 aa4□□□□□ -1.77
SMG1-207ENST00000563235 PLPP4Q5VZY2 271 aa4□□□□□ -1.77
SMG1-207ENST00000563235 TEX261Q6UWH6 196 aa4□□□□□ -1.77
SMG1-207ENST00000563235 BHLHA9Q7RTU4 235 aa4□□□□□ -1.77
SMG1-207ENST00000563235 GPD1LQ8N335 351 aa4□□□□□ -1.77
SMG1-207ENST00000563235 GDPD1Q8N9F7 314 aa4□□□□□ -1.77
SMG1-207ENST00000563235 FNDC9Q8TBE3 224 aa4□□□□□ -1.77
SMG1-207ENST00000563235 ARPC1AQ92747 370 aa4□□□□□ -1.77
SMG1-207ENST00000563235 DLX4Q92988 240 aaPredicted RBP4□□□□□ -1.77
SMG1-207ENST00000563235 PNPLA2Q96AD5 504 aa4□□□□□ -1.77
SMG1-207ENST00000563235 SEC22AQ96IW7 307 aa4□□□□□ -1.77
SMG1-207ENST00000563235 ADGRG7Q96K78 797 aa4□□□□□ -1.77
SMG1-207ENST00000563235 SIGLEC10Q96LC7 697 aa4□□□□□ -1.77
SMG1-207ENST00000563235 OR2M2Q96R28 347 aa4□□□□□ -1.77
SMG1-207ENST00000563235 SMIM3Q9BZL3 60 aa4□□□□□ -1.77
SMG1-207ENST00000563235 ASIC5Q9NY37 505 aa4□□□□□ -1.77
SMG1-207ENST00000563235 ERG28Q9UKR5 140 aa4□□□□□ -1.77
SMG1-207ENST00000563235 LTN1O94822 1766 aa4□□□□□ -1.77
SMG1-207ENST00000563235 CDC14CA4D256 554 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 EI24O14681 340 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 SULT1A3P0DMM9 295 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 SULT1A4P0DMN0 295 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 IL7P13232 177 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 BIDP55957 195 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 GABARAPL2P60520 117 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 OPCMLQ14982 345 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 QPRTQ15274 297 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 FAAP20Q6NZ36 180 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 TRIM40Q6P9F5 258 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 TOMM20LQ6UXN7 152 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 FA2HQ7L5A8 372 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 OR8I2Q8N0Y5 310 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 GAPTQ8N292 157 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 CHST4Q8NCG5 386 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 ORAOV1Q8WV07 137 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.99□□□□□ -1.77
SMG1-207ENST00000563235 P2RY11Q96G91 374 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 LINC00470Q9BZP3 86 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 FBXL12Q9NXK8 326 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 PRNDQ9UKY0 176 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 HDGFL3Q9Y3E1 203 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 TCRBV3S1A0A5B6 114 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 TRAPPC13A5PLN9 417 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 ZNF850A8MQ14 1090 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.99□□□□□ -1.77
SMG1-207ENST00000563235 FABP7O15540 132 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 CD79AP11912 226 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 SPNP16150 400 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 CXCL3P19876 107 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 FBXW4P57775 412 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 MFAP5Q13361 173 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 OR5I1Q13606 314 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 LAGE3Q14657 143 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 P2RY6Q15077 328 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 SHHQ15465 462 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 SLC25A35Q3KQZ1 300 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 FAM120AOSQ5T036 256 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 C11orf42Q8N5U0 333 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 OR7A2PQ8NGA2 310 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 OR4E2Q8NGC2 313 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 OR52L1Q8NGH7 329 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 GPR82Q96P67 336 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 TRIB3Q96RU7 358 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 MACROD1Q9BQ69 325 aa3.99□□□□□ -1.77
SMG1-207ENST00000563235 RTBDNQ9BSG5 229 aaPredicted RBP3.99□□□□□ -1.77
SMG1-207ENST00000563235 EBPLQ9BY08 206 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms