RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 NDUFB11Q9NX14 153 aa5.09□□□□□ -1.59
CNOT1-204ENST00000563130 ZNF780AO75290 641 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-204ENST00000563130 CDRT1O95170 752 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 OR2H2O95918 312 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 MAS1P04201 325 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 IGHV4-38-2P0DP08 117 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 CALCBP10092 127 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 SRMP19623 302 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 ARF6P62330 175 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 FABP5Q01469 135 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 ARMCX4Q5H9R4 360 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF773Q6PK81 442 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 METAP1DQ6UB28 335 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-204ENST00000563130 FIP1L1Q6UN15 594 aaKnown RBP5.08□□□□□ -1.6
CNOT1-204ENST00000563130 C9orf139Q6ZV77 190 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 CEACAM19Q7Z692 300 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 LRRTM1Q86UE6 522 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 SATL1Q86VE3 508 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 Q8N7P7 452 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 FCGR1BQ92637 280 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 TNFRSF14Q92956 283 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 UQCC2Q9BRT2 126 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 C19orf12Q9NSK7 152 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 NUP50Q9UKX7 468 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 GSTK1Q9Y2Q3 226 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 A0A0G2JK05 382 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 M0R1W7 72 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 SH2D1BO14796 132 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 TOX4O94842 621 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 IFNA2P01563 188 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 CSN2P05814 226 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 GALP22466 123 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 OR3A1P47881 315 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 BPIFB3P59826 476 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 RPL31P62899 125 aaKnown RBP5.08□□□□□ -1.6
CNOT1-204ENST00000563130 IL13RA2Q14627 380 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 HSD17B12Q53GQ0 312 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 SYT6Q5T7P8 510 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-204ENST00000563130 METTL11BQ5VVY1 283 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 ASCC1Q8N9N2 400 aaKnown RBP5.08□□□□□ -1.6
CNOT1-204ENST00000563130 CHST4Q8NCG5 386 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 OR4S1Q8NGB4 309 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 OR4D6Q8NGJ1 314 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 OR5D13Q8NGL4 314 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 H1FXQ92522 213 aaKnown RBP5.08□□□□□ -1.6
CNOT1-204ENST00000563130 FAM192AQ9GZU8 254 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 METTL9Q9H1A3 318 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 EXOSC4Q9NPD3 245 aaKnown RBP5.08□□□□□ -1.6
CNOT1-204ENST00000563130 GLS2Q9UI32 602 aa5.08□□□□□ -1.6
CNOT1-204ENST00000563130 TRAV40A0A0B4J280 105 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 CENPVL3A0A0U1RRI6 287 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 TRDV1A0A1B0GX56 115 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 A0A1W2PP11 408 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 SLC33A1O00400 549 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 CCRL2O00421 344 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 MGST3O14880 152 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 ARL6IP5O75915 188 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 PRTN3P24158 256 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 ERP29P30040 261 aaKnown RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 CAPZA1P52907 286 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 SNU13P55769 128 aaKnown RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 DLX6P56179 175 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 PAX5Q02548 391 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 SCGB2A2Q13296 93 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF273Q14593 569 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 PDCD1Q15116 288 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 RSU1Q15404 277 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 C1orf100Q5SVJ3 147 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 TMEM200BQ69YZ2 307 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 USP43Q70EL4 1123 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 TCF23Q7RTU1 214 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 JAGN1Q8N5M9 183 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 OR10K1Q8NGX5 313 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 TBC1D15Q8TC07 691 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 MUL1Q969V5 352 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 FOXRED1Q96CU9 486 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 MRPS24Q96EL2 167 aaKnown RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 GFI1Q99684 422 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 PCGF1Q9BSM1 259 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 PRDM13Q9H4Q3 707 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 METTL8Q9H825 291 aaKnown RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 A0A0A6YYJ9 748 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 TRAV24A0A0B4J272 114 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 A0A1W2PQ09 198 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 SHISA3A0PJX4 238 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 TRIM64CA6NLI5 447 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 C17orf98A8MV24 154 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 SIRPB1O00241 398 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 HTR3BO95264 441 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 GTF2F2P13984 249 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF44P15621 663 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 RBM11P57052 281 aaKnown RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 MEF2CQ06413 473 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 GPR176Q14439 515 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 ODF1Q14990 250 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 GRK1Q15835 563 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 PIGYQ3MUY2 71 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 SLC22A6Q4U2R8 563 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 GLT8D1Q68CQ7 371 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms