RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MAGEA13PA6NCF6 341 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 CLDN34H7C241 214 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 DEGS1O15121 323 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 ZNF780AO75290 641 aaPredicted RBP13.54□□□□□ -0.24
CDT1-202ENST00000562747 SC5DO75845 299 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 MAS1P04201 325 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 HSMCR30P0CW71 290 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 CCL3L1P16619 93 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 UBE2E1P51965 193 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 DEFA6Q01524 100 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 EDDM3AQ14507 147 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 TRAM1Q15629 374 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 LIPKQ5VXJ0 399 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 PDZD9Q8IXQ8 264 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 C11orf42Q8N5U0 333 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 ZDHHC16Q969W1 377 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 NKX3-1Q99801 234 aaPredicted RBP13.54□□□□□ -0.24
CDT1-202ENST00000562747 PCDHB16Q9NRJ7 776 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 ING4Q9UNL4 249 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 SF3B6Q9Y3B4 125 aaKnown RBP13.54□□□□□ -0.24
CDT1-202ENST00000562747 LINC00312Q9Y6C7 94 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 A0A0G2JK05 382 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 MDFIC2A0A1B0GVS7 189 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 MEGF11A6BM72 1044 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 C17orf98A8MV24 154 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 SLC33A1O00400 549 aaPredicted RBP13.53□□□□□ -0.24
CDT1-202ENST00000562747 CDRT1O95170 752 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 HTR3BO95264 441 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 RBP4P02753 201 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 CSTBP04080 98 aaKnown RBP13.53□□□□□ -0.24
CDT1-202ENST00000562747 CSN2P05814 226 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 ZNF728P0DKX0 622 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 CPEP16870 476 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 PSMA1P25786 263 aaKnown RBP13.53□□□□□ -0.24
CDT1-202ENST00000562747 DLX1P56177 255 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 DLX6P56179 175 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 SCN1BQ07699 218 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 KLRD1Q13241 179 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 GPR176Q14439 515 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 NHLRC3Q5JS37 347 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 TREML4Q6UXN2 200 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 Q6YL49 198 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 PIP4P2Q8N4L2 257 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 JAGN1Q8N5M9 183 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 OR10K1Q8NGX5 313 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 PHYHIPQ92561 330 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 MGLLQ99685 303 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 YTHDF1Q9BYJ9 559 aaKnown RBP13.53□□□□□ -0.24
CDT1-202ENST00000562747 HEXA-AS1Q9H8Q6 139 aa13.53□□□□□ -0.24
CDT1-202ENST00000562747 PRKDCP78527 4128 aaKnown RBP13.53□□□□□ -0.24
CDT1-202ENST00000562747 NPFFO15130 113 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 MAP2K4P45985 399 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 P2RX3P56373 397 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 ERVFRD-1P60508 538 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 INSL4Q14641 139 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 HCP5Q6MZN7 132 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 TCF23Q7RTU1 214 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 ZNF367Q7RTV3 350 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 LINC00596Q86U02 117 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 LYPD6Q86Y78 171 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 OSR2Q8N2R0 312 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 ZNF714Q96N38 554 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 NR1H4Q96RI1 486 aaPredicted RBP13.52□□□□□ -0.25
CDT1-202ENST00000562747 UQCC2Q9BRT2 126 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 PPA2Q9H2U2 334 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 TCF7L1Q9HCS4 588 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 ACOT13Q9NPJ3 140 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 ST3GAL6Q9Y274 331 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 MRPS28Q9Y2Q9 187 aaKnown RBP13.52□□□□□ -0.25
CDT1-202ENST00000562747 DSCAML1Q8TD84 2053 aa13.52□□□□□ -0.25
CDT1-202ENST00000562747 A0A0U1RQK1 487 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 HOXA3O43365 443 aaPredicted RBP13.51□□□□□ -0.25
CDT1-202ENST00000562747 RNASE1P07998 156 aaKnown RBP13.51□□□□□ -0.25
CDT1-202ENST00000562747 UCHL1P09936 223 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 SERPINA2P20848 420 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 GP2P55259 537 aaKnown RBP13.51□□□□□ -0.25
CDT1-202ENST00000562747 RBM11P57052 281 aaKnown RBP13.51□□□□□ -0.25
CDT1-202ENST00000562747 PRB3Q04118 309 aaPredicted RBP13.51□□□□□ -0.25
CDT1-202ENST00000562747 SLC9A3R2Q15599 337 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 PIGYQ3MUY2 71 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 HSD17B12Q53GQ0 312 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 CEACAM19Q7Z692 300 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 LDLRAD3Q86YD5 345 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 SVOPQ8N4V2 548 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 TMEM86BQ8N661 226 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 TPRX1Q8N7U7 411 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 MUL1Q969V5 352 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 SLC25A28Q96A46 364 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 IFT22Q9H7X7 185 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 UBE2J1Q9Y385 318 aaPredicted RBP13.51□□□□□ -0.25
CDT1-202ENST00000562747 FAM96BQ9Y3D0 163 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 VWFP04275 2813 aa13.51□□□□□ -0.25
CDT1-202ENST00000562747 TRAV24A0A0B4J272 114 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 MELTFP08582 738 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 FBP1P09467 338 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 GTF2F2P13984 249 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 SRMP19623 302 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 KCNJ3P48549 501 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 EMX1Q04741 257 aaPredicted RBP13.5□□□□□ -0.25
CDT1-202ENST00000562747 MPV17LQ2QL34 196 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms