RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 OR51D1Q8NGF3 324 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 RFKQ969G6 155 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 TOMM40LQ969M1 308 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 SPSB1Q96BD6 273 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 SPACA5Q96QH8 159 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 CIB1Q99828 191 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 MOB4Q9Y3A3 225 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 HSPE1-MOB4S4R3N1 261 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 NUDT19A8MXV4 375 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 DEGS1O15121 323 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 IGLV1-47P01700 117 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 FASP25445 335 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 ZNF85Q03923 595 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 HES1Q14469 280 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 ZNF329Q86UD4 541 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 LINC00482Q8N8I6 264 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 OR8J1Q8NGP2 316 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 OR13C3Q8NGS6 347 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 OR13C9Q8NGT0 318 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 OR2G2Q8NGZ5 317 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 CORO2AQ92828 525 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 RPEQ96AT9 228 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 GABARAPL1Q9H0R8 117 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 RYR3Q15413 4870 aa10.33□□□□□ -0.76
SF3B3-202ENST00000562722 DSCAML1Q8TD84 2053 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 IGKV1-12A0A0C4DH73 117 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 DAPL1A0PJW8 107 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 ZNF729A6NN14 1252 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-202ENST00000562722 OOSP1A8MZH6 123 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 HSPB6O14558 160 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 KDM4BO94953 1096 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 IGKV1D-12P01611 117 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 AMY1AP04745 511 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 AMY2AP04746 511 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 SNRNP70P08621 437 aaKnown RBP10.32□□□□□ -0.76
SF3B3-202ENST00000562722 HTR1AP08908 422 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 CCDC159P0C7I6 412 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 CD34P28906 385 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 POLR2IP36954 125 aaKnown RBP10.32□□□□□ -0.76
SF3B3-202ENST00000562722 GLP1RP43220 463 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 TMED1Q13445 227 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 AMIGO2Q86SJ2 522 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 MRPL41Q8IXM3 137 aaKnown RBP10.32□□□□□ -0.76
SF3B3-202ENST00000562722 CHST4Q8NCG5 386 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 OR9G1Q8NH87 305 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 EME1Q96AY2 570 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 SLC7A6OSQ96CW6 309 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-202ENST00000562722 HRASLS5Q96KN8 279 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 COMMD4Q9H0A8 199 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 PCDHB16Q9NRJ7 776 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 IMPAD1Q9NX62 359 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 OR6C3Q9NZP0 311 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 FRRS1LQ9P0K9 344 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 HHLA2Q9UM44 414 aa10.32□□□□□ -0.76
SF3B3-202ENST00000562722 AMMECR1Q9Y4X0 333 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-202ENST00000562722 SERPINE3A8MV23 424 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 SLC33A1O00400 549 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-202ENST00000562722 IGHV3-7P01780 117 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 CSN2P05814 226 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 HCKP08631 526 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 TMEM225BP0DP42 221 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 VSIG8P0DPA2 414 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 TMEM11P17152 192 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 LMO1P25800 156 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 ISL1P61371 349 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 LTC4SQ16873 150 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 OR56B4Q8NH76 319 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 LEAP2Q969E1 77 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 COQ2Q96H96 371 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 NR1H4Q96RI1 486 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-202ENST00000562722 MBOAT4Q96T53 435 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 PPIL3Q9H2H8 161 aaKnown RBP10.31□□□□□ -0.76
SF3B3-202ENST00000562722 AP4S1Q9Y587 144 aa10.31□□□□□ -0.76
SF3B3-202ENST00000562722 MEIKINA0A087WXM9 373 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 KBTBD11-OT1A0A1B0GTJ5 212 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 SLC16A6O15403 523 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 ISG15P05161 165 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 FCGR1AP12314 374 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 RAB25P57735 213 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 NANOS3P60323 173 aaKnown RBP10.3□□□□□ -0.76
SF3B3-202ENST00000562722 RPL23AP62750 156 aaKnown RBP10.3□□□□□ -0.76
SF3B3-202ENST00000562722 SLC35B1P78383 322 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 EGFEM1PQ0D2K5 195 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 DCTN2Q13561 401 aaKnown RBP10.3□□□□□ -0.76
SF3B3-202ENST00000562722 HNF4GQ14541 408 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 C17orf58Q2M2W7 97 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 PAN3Q58A45 887 aaKnown RBP10.3□□□□□ -0.76
SF3B3-202ENST00000562722 UTF1Q5T230 341 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 Q6P435 159 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 UNQ9370/PRO34162Q6UXP9 181 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 ETV3LQ6ZN32 361 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 C8orf86Q6ZUL3 223 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 OR2W3Q7Z3T1 314 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 RNF144BQ7Z419 303 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 KCTD20Q7Z5Y7 419 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 SAXO1Q8IYX7 474 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 DRAM1Q8N682 238 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 ZNF565Q8N9K5 539 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 KLHL30-AS1Q8NEE0 82 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms