RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 OR4S1Q8NGB4 309 aa11.04□□□□□ -0.64
CDH1-204ENST00000562118 CORO2AQ92828 525 aa11.04□□□□□ -0.64
CDH1-204ENST00000562118 TNFRSF14Q92956 283 aa11.04□□□□□ -0.64
CDH1-204ENST00000562118 WDFY2Q96P53 400 aa11.04□□□□□ -0.64
CDH1-204ENST00000562118 MRI1Q9BV20 369 aa11.04□□□□□ -0.64
CDH1-204ENST00000562118 TM2D1Q9BX74 207 aa11.04□□□□□ -0.64
CDH1-204ENST00000562118 OR51E2Q9H255 320 aa11.04□□□□□ -0.64
CDH1-204ENST00000562118 ST3GAL6Q9Y274 331 aa11.04□□□□□ -0.64
CDH1-204ENST00000562118 HTR3BO95264 441 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 CALCBP10092 127 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 NDUFB7P17568 137 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 SERPINA2P20848 420 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 GADD45AP24522 165 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 HTR2CP28335 458 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 ALDH3B2P48448 385 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
CDH1-204ENST00000562118 SLC22A6Q4U2R8 563 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 TMEM200BQ69YZ2 307 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 TPRA1Q86W33 373 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 ASCC1Q8N9N2 400 aaKnown RBP11.03□□□□□ -0.64
CDH1-204ENST00000562118 COQ2Q96H96 371 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 BEX2Q9BXY8 128 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 LINC00574Q9H8X3 128 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 VCX3AQ9NNX9 186 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 ZNF581Q9P0T4 197 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 ING4Q9UNL4 249 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 AK6Q9Y3D8 172 aaKnown RBP11.03□□□□□ -0.64
CDH1-204ENST00000562118 V9GY05 133 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 JMJD1CQ15652 2540 aa11.03□□□□□ -0.64
CDH1-204ENST00000562118 IFITM5A6NNB3 132 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 FOXI3A8MTJ6 420 aaPredicted RBP11.02□□□□□ -0.65
CDH1-204ENST00000562118 C17orf98A8MV24 154 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 AIPO00170 330 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 GEMIN2O14893 280 aaKnown RBP11.02□□□□□ -0.65
CDH1-204ENST00000562118 CSTBP04080 98 aaKnown RBP11.02□□□□□ -0.65
CDH1-204ENST00000562118 TFAP2AP05549 437 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 GLAP06280 429 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 CGB3P0DN86 165 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 CGB7P0DN87 165 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 MGMTP16455 207 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 RANBP1P43487 201 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 P2RX3P56373 397 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 BPIFB3P59826 476 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 ZNF273Q14593 569 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 GRK1Q15835 563 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 SIGIRRQ6IA17 410 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 IL17RELQ6ZVW7 336 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 OR2W3Q7Z3T1 314 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 FAM89BQ8N5H3 189 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 PPP1R35Q8TAP8 253 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 NANPQ8TBE9 248 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 S100A13Q99584 98 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 MRPS26Q9BYN8 205 aaKnown RBP11.02□□□□□ -0.65
CDH1-204ENST00000562118 CST11Q9H112 138 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 SSR3Q9UNL2 185 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 LINC00312Q9Y6C7 94 aa11.02□□□□□ -0.65
CDH1-204ENST00000562118 SIRPB1O00241 398 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 PDCD5O14737 125 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 DEGS1O15121 323 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 ZNF44P15621 663 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 SRD5A1P18405 259 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 RAB3BP20337 219 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 GABRR1P24046 479 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 PRTN3P24158 256 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 MYL9P24844 172 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 OR10A3P58181 314 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 RPS27AP62979 156 aaKnown RBP11.01□□□□□ -0.65
CDH1-204ENST00000562118 PDCD1Q15116 288 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 TIMM50Q3ZCQ8 353 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 METTL11BQ5VVY1 283 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 RSBN1Q5VWQ0 802 aaPredicted RBP11.01□□□□□ -0.65
CDH1-204ENST00000562118 HCP5Q6MZN7 132 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 GDPD3Q7L5L3 318 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 KCNG3Q8TAE7 436 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 H1FXQ92522 213 aaKnown RBP11.01□□□□□ -0.65
CDH1-204ENST00000562118 CENPOQ9BU64 300 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 CHST6Q9GZX3 395 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 PRDM13Q9H4Q3 707 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 METTL8Q9H825 291 aaKnown RBP11.01□□□□□ -0.65
CDH1-204ENST00000562118 SPACA1Q9HBV2 294 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 STEAP1Q9UHE8 339 aa11.01□□□□□ -0.65
CDH1-204ENST00000562118 UBE2J1Q9Y385 318 aaPredicted RBP11.01□□□□□ -0.65
CDH1-204ENST00000562118 A0A0A6YYD4 124 aa11□□□□□ -0.65
CDH1-204ENST00000562118 NOTOA8MTQ0 251 aa11□□□□□ -0.65
CDH1-204ENST00000562118 TMEM127O75204 238 aa11□□□□□ -0.65
CDH1-204ENST00000562118 TOX4O94842 621 aa11□□□□□ -0.65
CDH1-204ENST00000562118 IGHV4-38-2P0DP08 117 aa11□□□□□ -0.65
CDH1-204ENST00000562118 SNU13P55769 128 aaKnown RBP11□□□□□ -0.65
CDH1-204ENST00000562118 ARF6P62330 175 aa11□□□□□ -0.65
CDH1-204ENST00000562118 RAB11BQ15907 218 aa11□□□□□ -0.65
CDH1-204ENST00000562118 KRTAP21-3Q3LHN1 58 aa11□□□□□ -0.65
CDH1-204ENST00000562118 SLC35E4Q6ICL7 350 aa11□□□□□ -0.65
CDH1-204ENST00000562118 SLC16A12Q6ZSM3 486 aa11□□□□□ -0.65
CDH1-204ENST00000562118 VMO1Q7Z5L0 202 aa11□□□□□ -0.65
CDH1-204ENST00000562118 CMTM4Q8IZR5 234 aa11□□□□□ -0.65
CDH1-204ENST00000562118 SUMF2Q8NBJ7 301 aa11□□□□□ -0.65
CDH1-204ENST00000562118 PTX4Q96A99 478 aa11□□□□□ -0.65
CDH1-204ENST00000562118 KCTD7Q96MP8 289 aa11□□□□□ -0.65
CDH1-204ENST00000562118 CHCHD6Q9BRQ6 235 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms