RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 CCL17Q92583 94 aa18.81■□□□□ 0.6
SYNGR3-202ENST00000562045 SEH1LQ96EE3 360 aa18.81■□□□□ 0.6
SYNGR3-202ENST00000562045 ELF5Q9UKW6 265 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-202ENST00000562045 YLPM1P49750 1951 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 ORC5O43913 435 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 RBBP9O75884 186 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 GDNFP39905 211 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 PMELP40967 661 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 GUCA2AQ02747 115 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 SSBP1Q04837 148 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 ATAD3CQ5T2N8 411 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 ZNF57Q68EA5 555 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 RTN4RL2Q86UN3 420 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 GCSAMQ8N6F7 178 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 SETD6Q8TBK2 473 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 HPS1Q92902 700 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 WDR13Q9H1Z4 485 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 IFT22Q9H7X7 185 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 CHODLQ9H9P2 273 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 MYOZ1Q9NP98 299 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 RNF7Q9UBF6 113 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 KLK11Q9UBX7 282 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 MTFP1Q9UDX5 166 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 NPTNQ9Y639 398 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 F8P00451 2351 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 WNT9BO14905 357 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 CA11O75493 328 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 GIFP27352 417 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 DUSP1P28562 367 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 DSCR9P59020 149 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 ACTBP60709 375 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 ACTG1P63261 375 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 MRPS11P82912 194 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 PDCD1Q15116 288 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 RGS21Q2M5E4 152 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 FAM90A1Q86YD7 464 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 TOMM5Q8N4H5 51 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 DLL4Q9NR61 685 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 ZNF581Q9P0T4 197 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 RCC2Q9P258 522 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 GLS2Q9UI32 602 aa18.8■□□□□ 0.6
SYNGR3-202ENST00000562045 LRRC30A6NM36 301 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 LHBP01229 141 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 IRF2P14316 349 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 AP3S2P59780 193 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 ARFRP1Q13795 201 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 OLFML2AQ68BL7 652 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 POC5Q8NA72 575 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 NUDCD2Q8WVJ2 157 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 PIMREGQ9BSJ6 248 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 TMUB1Q9BVT8 246 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 REG4Q9BYZ8 158 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 TAS2R8Q9NYW2 309 aa18.79■□□□□ 0.6
SYNGR3-202ENST00000562045 MED13LQ71F56 2210 aa18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 C3orf80F5H4A9 247 aa18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 SH2D1BO14796 132 aa18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 SMAD7O15105 426 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 ECDO95905 644 aaPredicted RBP18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 KNG1P01042 644 aa18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 GSTT2BP0CG30 244 aa18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 ZNF44P15621 663 aa18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 TRAPPC6BQ86SZ2 158 aa18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 TBC1D24Q9ULP9 559 aa18.78■□□□□ 0.6
SYNGR3-202ENST00000562045 DEGS1O15121 323 aa18.77■□□□□ 0.6
SYNGR3-202ENST00000562045 ASAH1Q13510 395 aa18.77■□□□□ 0.6
SYNGR3-202ENST00000562045 HFEQ30201 348 aa18.77■□□□□ 0.6
SYNGR3-202ENST00000562045 AVPI1Q5T686 147 aa18.77■□□□□ 0.6
SYNGR3-202ENST00000562045 SULT4A1Q9BR01 284 aa18.77■□□□□ 0.6
SYNGR3-202ENST00000562045 FAAP24Q9BTP7 215 aa18.77■□□□□ 0.6
SYNGR3-202ENST00000562045 IGHV4-61A0A0C4DH41 118 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 LINC00854A0A1B0GVQ3 168 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 MEIS3P1A6NDR6 274 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 NDUFS8O00217 210 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 GLAP06280 429 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 EGR1P18146 543 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 CBX5P45973 191 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 MRPS15P82914 257 aaKnown RBP18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 Q6P435 159 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 TMEM106BQ9NUM4 274 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 DNAJB11Q9UBS4 358 aa18.77■□□□□ 0.59
SYNGR3-202ENST00000562045 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 IFNL4K9M1U5 179 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 PPIHO43447 177 aaKnown RBP18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 SSX5O60225 188 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 OR2H2O95918 312 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 HAND1O96004 215 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 CSF1P09603 554 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 C1orf87Q8N0U7 546 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 BOLLQ8N9W6 283 aaKnown RBP18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 COX4I2Q96KJ9 171 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 SMR3AQ99954 134 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 NLKQ9UBE8 527 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 OR14J1Q9UGF5 321 aa18.76■□□□□ 0.59
SYNGR3-202ENST00000562045 ABCA2Q9BZC7 2435 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 ANKRD20A5PA0PJZ0 165 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 MCRIP1C9JLW8 97 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 CYB5R3P00387 301 aaPredicted RBP18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 SLC25A16P16260 332 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 DYRK1AQ13627 763 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 KLF9Q13886 244 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms