RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CYLC2Q14093 348 aaPredicted RBP4.02□□□□□ -1.77
HERC1-213ENST00000561359 KIAA0141Q14154 515 aaPredicted RBP4.02□□□□□ -1.77
HERC1-213ENST00000561359 CYP51A1Q16850 503 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 HLA-DRB5Q30154 266 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 ZBED5Q49AG3 693 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 PRAMEF5Q5TYX0 476 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 OR52W1Q6IF63 320 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 HAGHLQ6PII5 290 aaPredicted RBP4.02□□□□□ -1.77
HERC1-213ENST00000561359 LINC00322Q6ZN03 302 aaPredicted RBP4.02□□□□□ -1.77
HERC1-213ENST00000561359 Q6ZNX1 250 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 ASRGL1Q7L266 308 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 TCF23Q7RTU1 214 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 TRPM8Q7Z2W7 1104 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 ZDHHC21Q8IVQ6 265 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 BATF2Q8N1L9 274 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 TPRX1Q8N7U7 411 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM156AQ8NDB6 213 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 DNAJC9Q8WXX5 260 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 AQP3Q92482 292 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 TOMM40LQ969M1 308 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 SGK3Q96BR1 496 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 TAMM41Q96BW9 452 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 OVOL2Q9BRP0 275 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 SIKE1Q9BRV8 207 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 POLR2J2Q9GZM3 115 aaKnown RBP4.02□□□□□ -1.77
HERC1-213ENST00000561359 POLR2J3Q9H1A7 115 aaKnown RBP4.02□□□□□ -1.77
HERC1-213ENST00000561359 OR51I2Q9H344 312 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 IKZF5Q9H5V7 419 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 PCDHB16Q9NRJ7 776 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 VAPAQ9P0L0 249 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 SLC22A13Q9Y226 551 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 LINC00312Q9Y6C7 94 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 WSB1Q9Y6I7 421 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 PKD1P98161 4303 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 IGHV4OR15-8A0A075B7B6 117 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 A0A087WW49 117 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 LY6LH3BQJ8 138 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 BOLA2-SMG1P6H3BVE0 249 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 CDC42EP2O14613 210 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 RGS11O94810 467 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 NDUFB8O95169 186 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 NDUFB2O95178 105 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 RENP00797 406 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 CST4P01036 141 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 SHBGP04278 402 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 OR5H8P0DN80 308 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 CDK2P24941 298 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 ACKR3P25106 362 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 IFNA8P32881 189 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 VHLP40337 213 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 SLC1A6P48664 564 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 CX3CR1P49238 355 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 CD81P60033 236 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 PRKCDQ05655 676 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 KLHL12Q53G59 568 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 CEP78Q5JTW2 689 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 LCN12Q6JVE5 192 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 ZNF730Q6ZMV8 503 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 FAM57BQ71RH2 274 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 DCXRQ7Z4W1 244 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 LYG2Q86SG7 212 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 TGIF2LXQ8IUE1 241 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 OR8H2Q8N162 312 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 DEFB125Q8N687 156 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 POC1AQ8NBT0 407 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 RASSF5Q8WWW0 418 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 TMEM106AQ96A25 262 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 FLYWCH2Q96CP2 140 aaKnown RBP4.01□□□□□ -1.77
HERC1-213ENST00000561359 LRGUKQ96M69 825 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 SORT1Q99523 831 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 RASL11BQ9BPW5 248 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 C20orf27Q9GZN8 174 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 TOLLIPQ9H0E2 274 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 SRD5A3Q9H8P0 318 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 ZNF286AQ9HBT8 521 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 NRIP3Q9NQ35 241 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 RPRD1BQ9NQG5 326 aaKnown RBP4.01□□□□□ -1.77
HERC1-213ENST00000561359 SDR39U1Q9NRG7 319 aaPredicted RBP4.01□□□□□ -1.77
HERC1-213ENST00000561359 LIN7CQ9NUP9 197 aaKnown RBP4.01□□□□□ -1.77
HERC1-213ENST00000561359 PNPOQ9NVS9 261 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 FKBP14Q9NWM8 211 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 DNAJC27Q9NZQ0 273 aa4.01□□□□□ -1.77
HERC1-213ENST00000561359 MRPS28Q9Y2Q9 187 aaKnown RBP4.01□□□□□ -1.77
HERC1-213ENST00000561359 UNC119BA6NIH7 251 aa4□□□□□ -1.77
HERC1-213ENST00000561359 TRPC5OSA6NMA1 111 aa4□□□□□ -1.77
HERC1-213ENST00000561359 C16orf90A8MZG2 172 aa4□□□□□ -1.77
HERC1-213ENST00000561359 ZNF878C9JN71 531 aa4□□□□□ -1.77
HERC1-213ENST00000561359 RTL8CO15255 209 aa4□□□□□ -1.77
HERC1-213ENST00000561359 MPZL2O60487 215 aa4□□□□□ -1.77
HERC1-213ENST00000561359 ZNF737O75373 536 aa4□□□□□ -1.77
HERC1-213ENST00000561359 RAP2AP10114 183 aa4□□□□□ -1.77
HERC1-213ENST00000561359 HSD11B1P28845 292 aa4□□□□□ -1.77
HERC1-213ENST00000561359 SOX6P35712 828 aa4□□□□□ -1.77
HERC1-213ENST00000561359 SLC15A1P46059 708 aa4□□□□□ -1.77
HERC1-213ENST00000561359 RAB9AP51151 201 aa4□□□□□ -1.77
HERC1-213ENST00000561359 ZNF45Q02386 682 aa4□□□□□ -1.77
HERC1-213ENST00000561359 TNFRSF9Q07011 255 aa4□□□□□ -1.77
HERC1-213ENST00000561359 GRK1Q15835 563 aa4□□□□□ -1.77
HERC1-213ENST00000561359 CEACAM21Q3KPI0 293 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms