RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FER1L5A0AVI2 2057 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 PCDH11XQ9BZA7 1347 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 GREB1LQ9C091 1923 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 PRG4Q92954 1404 aaPredicted RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 RIMS2Q9UQ26 1411 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 TTC3P53804 2025 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 TRAV8-3A0A0A6YYJ7 113 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR6C6A6NF89 314 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ZNF233A6NK53 670 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 SHISA9B4DS77 424 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 C9JQL5 133 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 G3V2T6 193 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 BMPR1BO00238 502 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 CHST10O43529 356 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 SLC37A4O43826 429 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 KLRC4O43908 158 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PDE6DO43924 150 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 EIF1BO60739 113 aaKnown RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 PDCD6O75340 191 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ZNF253O75346 499 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ZFAND5O76080 213 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR7C1O76099 320 aaPredicted RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 FSHBP01225 129 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 IGLV2-11P01706 119 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 IGHV3-48P01763 117 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 SERPINA7P05543 415 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 CHTF8P0CG12 524 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 SULT1A3P0DMM9 295 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 SULT1A4P0DMN0 295 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR12D1P0DN82 309 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 IGHV3-43DP0DP04 118 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 GABRA1P14867 456 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 IDO1P14902 403 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ZNF30P17039 623 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 HIST1H1TP22492 207 aaPredicted RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 ZBTB25P24278 435 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 MIPP30301 263 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 TIMP3P35625 211 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 EIF1P41567 113 aaKnown RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR1E2P47887 323 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 GABARAPL2P60520 117 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 RPL23P62829 140 aaKnown RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 GNB1P62873 340 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 GRB2P62993 217 aaKnown RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 PRR3P79522 188 aaKnown RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 CXCL6P80162 114 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 HPCAP84074 193 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 EMX1Q04741 257 aaPredicted RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 TNFRSF9Q07011 255 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ZNF763Q0D2J5 394 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 C16orf72Q14CZ0 275 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 IRF4Q15306 451 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 GUCA2BQ16661 112 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 CEACAM16Q2WEN9 425 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 CCDC58Q4VC31 144 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PYCR3Q53H96 274 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 SLC25A30Q5SVS4 291 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 FAM162BQ5T6X4 162 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 HENMT1Q5T8I9 393 aaKnown RBP1.57□□□□□ -2.16
RTF1-207ENST00000561076 FAM78BQ5VT40 261 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 TMEM236Q5W0B7 351 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 C11orf87Q6NUJ2 197 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 DCUN1D2Q6PH85 259 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 TMPPEQ6ZT21 453 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 DPPA2Q7Z7J5 298 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 CAMK2N1Q7Z7J9 78 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 LYG2Q86SG7 212 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 LINC00596Q86U02 117 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 CALHM3Q86XJ0 350 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 MUC15Q8N387 334 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR2Z1Q8NG97 314 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 GPR32P1Q8NGA4 272 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR1P1Q8NH06 330 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR10A6Q8NH74 314 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR2V1Q8NHB1 315 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PIFOQ8TCI5 191 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 GNPDA2Q8TDQ7 276 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ORAOV1Q8WV07 137 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 BORCS5Q969J3 196 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 CLDN23Q96B33 292 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 TAMM41Q96BW9 452 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 TCEAL4Q96EI5 215 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 SMARCD1Q96GM5 515 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ANKRD36BP1Q96IX9 119 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 SIGLEC12Q96PQ1 595 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 OR2V2Q96R30 315 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PLEKHF1Q96S99 279 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ATOH8Q96SQ7 321 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 LINC01587Q99440 93 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PBDC1Q9BVG4 233 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 C19orf24Q9BVV8 132 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 DEFB127Q9H1M4 99 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 DCSTAMPQ9H295 470 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 LINC00597Q9H2U6 94 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 BOLA2Q9H3K6 86 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PARVBQ9HBI1 364 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PARP11Q9NR21 331 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ARMC1Q9NVT9 282 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 CMTM6Q9NX76 183 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PAIP2BQ9ULR5 123 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms