RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 LAMA1P25391 3075 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 KIAA0100Q14667 2235 aaKnown RBP14.3□□□□□ -0.12
TPM1-228ENST00000560975 C3orf85A0A1B0GTC6 90 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 A0A1B0GWJ7 208 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 XKRY2A2RUG3 117 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 NPIPB13A6NJU9 1138 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 B4DEV8 164 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 NPIPB4C9JG80 1138 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 THEGLP0DJG4 465 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 RND2P52198 227 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 RAB4BP61018 213 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 CLN3Q13286 438 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 PIGYQ3MUY2 71 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 SPIN3Q5JUX0 258 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 ZNF695Q8IW36 515 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 ODF3L1Q8IXM7 274 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 RAB24Q969Q5 203 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 C11orf1Q9H5F2 150 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 LYRM2Q9NU23 88 aaPredicted RBP14.3□□□□□ -0.12
TPM1-228ENST00000560975 C9orf50Q5SZB4 431 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 SLC25A47Q6Q0C1 308 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 OR10A7Q8NGE5 316 aa14.3□□□□□ -0.12
TPM1-228ENST00000560975 GNPNAT1Q96EK6 184 aaPredicted RBP14.3□□□□□ -0.12
TPM1-228ENST00000560975 C8orf33Q9H7E9 229 aaPredicted RBP14.3□□□□□ -0.12
TPM1-228ENST00000560975 ZNF732B4DXR9 585 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 TRDCB7Z8K6 153 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 OR2J2O76002 312 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 HBE1P02100 147 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 OR4A8P0C604 315 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 GRB2P62993 217 aaKnown RBP14.29□□□□□ -0.12
TPM1-228ENST00000560975 ZFP36L1Q07352 338 aaKnown RBP14.29□□□□□ -0.12
TPM1-228ENST00000560975 ZNF100Q8IYN0 542 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 NAT6Q93015 286 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 HIST1H2AAQ96QV6 131 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 METTL9Q9H1A3 318 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 LAMP3Q9UQV4 416 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 RALGAPA1Q6GYQ0 2036 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 TRAF3IP2O43734 574 aaPredicted RBP14.29□□□□□ -0.12
TPM1-228ENST00000560975 SP5Q6BEB4 398 aaPredicted RBP14.29□□□□□ -0.12
TPM1-228ENST00000560975 CCDC71LQ8N9Z2 235 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 OR2AE1Q8NHA4 323 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 WFIKKN1Q96NZ8 548 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 SNHG12Q9BXW3 62 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 CDH20Q9HBT6 801 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 CBLN4Q9NTU7 201 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 LRP4O75096 1905 aa14.29□□□□□ -0.12
TPM1-228ENST00000560975 IFNL4K9M1U5 179 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 ERVS71-1P61550 626 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 RNF4P78317 190 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 TMEM92Q6UXU6 159 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 IL22RA1Q8N6P7 574 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 MPPED1O15442 326 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 CEACAM6P40199 344 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 C17orf67Q0P5P2 114 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 ADIRFQ15847 76 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 MOB3AQ96BX8 217 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 ACTR3CQ9C0K3 210 aaPredicted RBP14.28□□□□□ -0.12
TPM1-228ENST00000560975 VSIRQ9H7M9 311 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 TRANK1O15050 2925 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 TRBV24-1A0A075B6N3 115 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 CHST1O43916 411 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 DFFBO76075 338 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 LBX1P52954 281 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 MRPS34P82930 218 aaKnown RBP14.28□□□□□ -0.12
TPM1-228ENST00000560975 ZNF441Q8N8Z8 693 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 PP6455Q8WZ26 134 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 RSG1Q9BU20 258 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 LRRC61Q9BV99 259 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 ANGPTL4Q9BY76 406 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 SDF2L1Q9HCN8 221 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 KLRF1Q9NZS2 232 aa14.28□□□□□ -0.12
TPM1-228ENST00000560975 ASXL3Q9C0F0 2248 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 SPTY2D1-AS1A0A0U1RR47 76 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 A0A1W2PNV4 684 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 TGOLN2O43493 480 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 CDS2O95674 445 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 OPN1MWP04001 364 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 POU2F2P09086 479 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 OPN1MW2P0DN77 364 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 OPN1MW3P0DN78 364 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 ZNF25P17030 456 aaPredicted RBP14.27□□□□□ -0.12
TPM1-228ENST00000560975 ZNF787Q6DD87 383 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 ZNF66Q6ZN08 573 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 BEND2Q8NDZ0 799 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 ZNF286AQ9HBT8 521 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 V9GYS6 101 aa14.27□□□□□ -0.12
TPM1-228ENST00000560975 SPTBN5Q9NRC6 3674 aaKnown RBP14.27□□□□□ -0.13
TPM1-228ENST00000560975 CEBPZOSA8MTT3 80 aa14.27□□□□□ -0.13
TPM1-228ENST00000560975 BCL2P10415 239 aa14.27□□□□□ -0.13
TPM1-228ENST00000560975 FOSL2P15408 326 aa14.27□□□□□ -0.13
TPM1-228ENST00000560975 DTYMKP23919 212 aa14.27□□□□□ -0.13
TPM1-228ENST00000560975 TBC1D26Q86UD7 250 aa14.27□□□□□ -0.13
TPM1-228ENST00000560975 OR6X1Q8NH79 312 aa14.27□□□□□ -0.13
TPM1-228ENST00000560975 RNASEH2CQ8TDP1 164 aaKnown RBP14.27□□□□□ -0.13
TPM1-228ENST00000560975 TMEM37Q8WXS4 190 aa14.27□□□□□ -0.13
TPM1-228ENST00000560975 IGKV1-27A0A075B6S5 117 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 TCRBV21S2A2A0A5A6 115 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 FBLP22087 321 aaKnown RBP14.26□□□□□ -0.13
TPM1-228ENST00000560975 GNRHRP30968 328 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 PNRC1Q12796 327 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms