RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CCDC90BQ9GZT6 254 aa10.58□□□□□ -0.72
CTDSPL2-209ENST00000560620 FKBP14Q9NWM8 211 aa10.58□□□□□ -0.72
CTDSPL2-209ENST00000560620 H3BUX3 64 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 SLC33A1O00400 549 aaPredicted RBP10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 RBP4P02753 201 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 MAS1P04201 325 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 IGHV1-8P0DP01 117 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 SERPINA2P20848 420 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 MDKP21741 143 aaPredicted RBP10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 MYF6P23409 242 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 MAPK3P27361 379 aaPredicted RBP10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 GLIPR1P48060 266 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 RAG2P55895 527 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 RPS11P62280 158 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 SPHARQ15513 63 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 PIGYQ3MUY2 71 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 PAN3Q58A45 887 aaKnown RBP10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 KRBOX4Q5JUW0 171 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 GDPGP1Q6ZNW5 385 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 C11orf42Q8N5U0 333 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 OR4F5Q8NH21 305 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 C17orf50Q8WW18 174 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 THRSPQ92748 146 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 CNBD2Q96M20 576 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 SSX3Q99909 188 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 TMED9Q9BVK6 235 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 ANKRD60Q9BZ19 345 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 GAL3ST2Q9H3Q3 398 aa10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 PAK1IP1Q9NWT1 392 aaPredicted RBP10.57□□□□□ -0.72
CTDSPL2-209ENST00000560620 TRAV8-7A0A075B6U6 113 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 RGS10O43665 173 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 CLPXO76031 633 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 OR7C1O76099 320 aaPredicted RBP10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 HSMCR30P0CW71 290 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 LMO1P25800 156 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 PAX6P26367 422 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 ERP29P30040 261 aaKnown RBP10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 DLX6P56179 175 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 BDH1Q02338 343 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 DOC2BQ14184 412 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 TAF9Q16594 264 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 SLC22A6Q4U2R8 563 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 PLA1AQ53H76 456 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 ELP2Q6IA86 826 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 Q6P435 159 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 OSR2Q8N2R0 312 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 BEND2Q8NDZ0 799 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 OR5R1Q8NH85 324 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 SGCDQ92629 289 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 OR5M11Q96RB7 305 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 CDCA4Q9BXL8 241 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 BEX1Q9HBH7 125 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 PCDHB16Q9NRJ7 776 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 VPREB3Q9UKI3 123 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 ST3GAL6Q9Y274 331 aa10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 UBE2J1Q9Y385 318 aaPredicted RBP10.56□□□□□ -0.72
CTDSPL2-209ENST00000560620 DSCAML1Q8TD84 2053 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 ODAMA1E959 279 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 MAGEA13PA6NCF6 341 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 ZNF780AO75290 641 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 ATP6V1G2O95670 118 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 IGFBP3P17936 291 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 FSTP19883 344 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 IL13RA2Q14627 380 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 LY6EQ16553 131 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 LRRC75BQ2VPJ9 315 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 ATAD3CQ5T2N8 411 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 PRAMEF5Q5TYX0 476 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 TCF23Q7RTU1 214 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 LHFPL4Q7Z7J7 247 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 OR4D6Q8NGJ1 314 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 NDNFQ8TB73 568 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 NEK7Q8TDX7 302 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 MUL1Q969V5 352 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 DERL3Q96Q80 235 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 BARHL1Q9BZE3 327 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 SLITRK2Q9H156 845 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 TCF7L1Q9HCS4 588 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 C1RLQ9NZP8 487 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 FOXJ3Q9UPW0 622 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 MRPS28Q9Y2Q9 187 aaKnown RBP10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 SESN1Q9Y6P5 492 aa10.55□□□□□ -0.72
CTDSPL2-209ENST00000560620 MEIKINA0A087WXM9 373 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 TRBV5-7A0A0A0MS05 114 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 FAM172BPA6NC97 362 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 POM121CA8CG34 1229 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 CSN2P05814 226 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 CD1AP06126 327 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 GTF2F2P13984 249 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 CDK2P24941 298 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 GLP1RP43220 463 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 RBM11P57052 281 aaKnown RBP10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 SLC35A2P78381 396 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 GPR176Q14439 515 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 FAM189A2Q15884 450 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 SSX2Q16385 188 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 ACSM3Q53FZ2 586 aa10.54□□□□□ -0.72
CTDSPL2-209ENST00000560620 RNLSQ5VYX0 342 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms