RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ODF3BA8MYP8 253 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PTGES3LE9PB15 166 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 HSPB6O14558 160 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 DEGS1O15121 323 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 MAGEB3O15480 346 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 RBP4P02753 201 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 ALDOBP05062 364 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 ARG1P05089 322 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 JUNBP17275 347 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 CELP19835 753 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 ERP29P30040 261 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 GDNFP39905 211 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PTGFRP43088 359 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 MTNR1BP49286 362 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 WNT4P56705 351 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PPP3R1P63098 170 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 INSL4Q14641 139 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 ATXN7L3Q14CW9 347 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 LY6EQ16553 131 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PIGYQ3MUY2 71 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 Q499Y3 187 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PLA1AQ53H76 456 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 YIF1BQ5BJH7 314 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 C6orf141Q5SZD1 244 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 UTF1Q5T230 341 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 DDI2Q5TDH0 399 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PRAMEF5Q5TYX0 476 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 ELP2Q6IA86 826 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 SHISA2Q6UWI4 295 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 TRAPPC6BQ86SZ2 158 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 NANOGP1Q8N7R0 232 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PPP1R35Q8TAP8 253 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PIFOQ8TCI5 191 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 MEGF9Q9H1U4 602 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PPIL3Q9H2H8 161 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 RHOFQ9HBH0 211 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 BEX1Q9HBH7 125 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 TMEM138Q9NPI0 162 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 PCDHGB5Q9Y5G0 923 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 ODAMA1E959 279 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 CLPSL1A2RUU4 121 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 FAM172BPA6NC97 362 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 BTBD17A6NE02 478 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 H0YJX3 145 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 MYL12BO14950 172 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 PIN1P1O15428 100 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 CLPXO76031 633 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 HTR3BO95264 441 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 CDK1P06493 297 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 BDKRB2P30411 391 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 ZNF93P35789 620 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 RAB13P51153 203 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 LGALS4P56470 323 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 RPL15P61313 204 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 DYNC1I2Q13409 638 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 RIPK1Q13546 671 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 RSU1Q15404 277 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 LRRC75BQ2VPJ9 315 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 KRBOX4Q5JUW0 171 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 OLFML2AQ68BL7 652 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 ZNF626Q68DY1 528 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 GDPGP1Q6ZNW5 385 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 Q6ZSV7 163 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 CHST4Q8NCG5 386 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 Q8NFD4 153 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 OR11H6Q8NGC7 330 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 OR51T1Q8NGJ9 327 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 OR13D1Q8NGV5 346 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 OR5R1Q8NH85 324 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 LINC01006Q8NI28 216 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 OR5M11Q96RB7 305 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 ZNF184Q99676 751 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 ING4Q9UNL4 249 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 UBE2J1Q9Y385 318 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 SESN1Q9Y6P5 492 aa9.43□□□□□ -0.9
RABGGTA-216ENST00000560243 CMYA5Q8N3K9 4069 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 TRGV10A0A0A0MS01 117 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 IGHV2-26A0A0B4J1V2 119 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 A0A1W2PP11 408 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 CHST1O43916 411 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 GPX5O75715 221 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 CSN2P05814 226 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 CDK2P24941 298 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 TGFBR2P37173 567 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 TAS2R43P59537 309 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 SSX2Q16385 188 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 PAN3Q58A45 887 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 DHRS7BQ6IAN0 325 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 PLPPR1Q8TBJ4 325 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 CORO2AQ92828 525 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 CPNE2Q96FN4 548 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 DERL3Q96Q80 235 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 SLITRK2Q9H156 845 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 TMEM133Q9H2Q1 129 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 KIF25Q9UIL4 384 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 ERGIC3Q9Y282 383 aa9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 LSM2Q9Y333 95 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-216ENST00000560243 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms