RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	CHST4	Q8NCG5	386 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR51T1	Q8NGJ9	327 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	METTL9	Q9H1A3	318 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	UNKL	Q9H9P5	680 aa	Known RBP	11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ACOT13	Q9NPJ3	140 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	IL36G	Q9NZH8	169 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ING4	Q9UNL4	249 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	KIAA2026	Q5HYC2	2103 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PSPN	O60542	156 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ZNF780A	O75290	641 aa	Predicted RBP	11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CSTB	P04080	98 aa	Known RBP	11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ZNF44	P15621	663 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PSMA1	P25786	263 aa	Known RBP	11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ARPC4	P59998	168 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SCN1B	Q07699	218 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GRK1	Q15835	563 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CEACAM19	Q7Z692	300 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	JAGN1	Q8N5M9	183 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TMEM203	Q969S6	136 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	NKX3-1	Q99801	234 aa	Predicted RBP	11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TCF7L1	Q9HCS4	588 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SIRT7	Q9NRC8	400 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849		A0A0G2JK05	382 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	hCG_1809904	A0A1W2PP81	198 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849		A0A1W2PPE2	198 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849		A0A1W2PR64	198 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849		A0A1W2PRV1	198 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SIRPB1	O00241	398 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MGST3	O14880	152 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	DEGS1	O15121	323 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	VENTX	O95231	258 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	HTR3B	O95264	441 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PRTN3	P24158	256 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MEF2C	Q06413	473 aa	Predicted RBP	11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GPR176	Q14439	515 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GPR107	Q5VW38	600 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PHC2	Q8IXK0	858 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	NKAIN3	Q8N8D7	197 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR10K1	Q8NGX5	313 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MDFI	Q99750	246 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CHST6	Q9GZX3	395 aa		11.22	□□□□□ -0.61
CHRNB4-204	ENST00000559849	IGHV1-69D	A0A0B4J2H0	117 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	IGHV1-69	P01742	117 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SRM	P19623	302 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ERP29	P30040	261 aa	Known RBP	11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GP2	P55259	537 aa	Known RBP	11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SRSF2	Q01130	221 aa	Known RBP	11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GUCA2A	Q02747	115 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	HSD17B12	Q53GQ0	312 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849		Q6P435	159 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ZNF367	Q7RTV3	350 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SIGLECL1	Q8N7X8	197 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR4S1	Q8NGB4	309 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PHYHIP	Q92561	330 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TNFRSF14	Q92956	283 aa		11.21	□□□□□ -0.61
CHRNB4-204	ENST00000559849	hADV38S2	A0JD32	116 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	RNF212B	A8MTL3	300 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	UCHL1	P09936	223 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	OR3A1	P47881	315 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	EDDM3A	Q14507	147 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	IL13RA2	Q14627	380 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	FAM27D1	Q5T7N8	215 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	NCR3LG1	Q68D85	454 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	LYPD6	Q86Y78	171 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	OSR2	Q8N2R0	312 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	C11orf42	Q8N5U0	333 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ISOC1	Q96CN7	298 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	UQCC2	Q9BRT2	126 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ST3GAL6	Q9Y274	331 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SF3B6	Q9Y3B4	125 aa	Known RBP	11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	STAB1	Q9NY15	2570 aa		11.21	□□□□□ -0.62
CHRNB4-204	ENST00000559849	FUOM	A2VDF0	154 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	RNASEK-C17orf49	H0YIS7	233 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SLC33A1	O00400	549 aa	Predicted RBP	11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	CSN2	P05814	226 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	GTF2F2	P13984	249 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	GABRA5	P31644	462 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	RPS25	P62851	125 aa	Known RBP	11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ZNF273	Q14593	569 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SLC22A6	Q4U2R8	563 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	NHLRC3	Q5JS37	347 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	RUSC1-AS1	Q66K80	236 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	TMEM91	Q6ZNR0	172 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	PDZD9	Q8IXQ8	264 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	FCGR1B	Q92637	280 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	BORCS5	Q969J3	196 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ZNF48	Q96MX3	618 aa	Predicted RBP	11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SLITRK2	Q9H156	845 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	PRDM13	Q9H4Q3	707 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SOX21	Q9Y651	276 aa	Predicted RBP	11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	TRIM77	I1YAP6	450 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ARL6IP5	O75915	188 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ZNF728	P0DKX0	622 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	CCL3L1	P16619	93 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SERPINA2	P20848	420 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	PSMB9	P28065	219 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	UBE2E1	P51965	193 aa		11.2	□□□□□ -0.62
CHRNB4-204	ENST00000559849	P2RX3	P56373	397 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms