RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 NCR3LG1Q68D85 454 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 CD200R1LQ6Q8B3 271 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 LHFPL4Q7Z7J7 247 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 ZNF575Q86XF7 245 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 MRPL41Q8IXM3 137 aaKnown RBP4.68□□□□□ -1.66
USP3-215ENST00000559771 CMTM4Q8IZR5 234 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 LYG1Q8N1E2 194 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 Q8N2B8 174 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 KLHDC1Q8N7A1 406 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 TCEANCQ8N8B7 351 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 BBS1Q8NFJ9 593 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 OR52N1Q8NH53 320 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 CHAC2Q8WUX2 184 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 MED30Q96HR3 178 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 PGAM5Q96HS1 289 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 ZNF488Q96MN9 340 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 OPALINQ96PE5 141 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 MICU1Q9BPX6 476 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 RTL8AQ9BWD3 113 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 MMP28Q9H239 520 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 AMBNQ9NP70 447 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 TVP23BQ9NYZ1 205 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 H2AFY2Q9P0M6 372 aaPredicted RBP4.68□□□□□ -1.66
USP3-215ENST00000559771 AASSQ9UDR5 926 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 DAPK2Q9UIK4 370 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 EXOGQ9Y2C4 368 aaKnown RBP4.68□□□□□ -1.66
USP3-215ENST00000559771 CAB39Q9Y376 341 aaPredicted RBP4.68□□□□□ -1.66
USP3-215ENST00000559771 LRP12Q9Y561 859 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 DNAH9Q9NYC9 4486 aa4.68□□□□□ -1.66
USP3-215ENST00000559771 TRBV23-1A0A0A0MS06 115 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 LOC100506127A0A0U1RQW1 187 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 TRDV1A0A1B0GX56 115 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 A0A1W2PQ09 198 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 BTBD17A6NE02 478 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 ANKRD61A6NGH8 418 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 NKX6-3A6NJ46 265 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 RFPL4AA6NLU0 287 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 ANXA2P2A6NMY6 339 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 RIIAD1A6NNX1 92 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 ZNF732B4DXR9 585 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 RFPL4AL1F8VTS6 287 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 J3QRK9 145 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 PSMD9O00233 223 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 SYNGR1O43759 233 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 ANGPTL7O43827 346 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 SRSF10O75494 262 aaKnown RBP4.67□□□□□ -1.66
USP3-215ENST00000559771 PAHP00439 452 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 IFNGP01579 166 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 APOC1P02654 83 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 H2BFMP0C1H6 154 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CD28P10747 220 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CCL3L1P16619 93 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 ZNF3P17036 446 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 ALOX5APP20292 161 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 GLRA1P23415 457 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 RANBP1P43487 201 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 GABRA2P47869 451 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CEBPDP49716 269 aaPredicted RBP4.67□□□□□ -1.66
USP3-215ENST00000559771 RAB13P51153 203 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 TAS2R43P59537 309 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 LSM3P62310 102 aaKnown RBP4.67□□□□□ -1.66
USP3-215ENST00000559771 GNG3P63215 75 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 MFGE8Q08431 387 aaPredicted RBP4.67□□□□□ -1.66
USP3-215ENST00000559771 ZNF273Q14593 569 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 FAM189A2Q15884 450 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 SSX1Q16384 188 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 AANATQ16613 207 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 LRRC75BQ2VPJ9 315 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CEP78Q5JTW2 689 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 AADACL4Q5VUY2 407 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 TMEM200BQ69YZ2 307 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 PLBD1Q6P4A8 553 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 TMPRSS11AQ6ZMR5 421 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 ACP7Q6ZNF0 438 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 Q6ZTK2 550 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 SHFQ7M4L6 423 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 TCF23Q7RTU1 214 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CCDC190Q86UF4 302 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CPOQ8IVL8 374 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 ZDHHC23Q8IYP9 409 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 TMEM185AQ8NFB2 350 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 OR52I1Q8NGK6 324 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 HAVCR2Q8TDQ0 301 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 THEM6Q8WUY1 208 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 UFD1Q92890 307 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 SLC25A46Q96AG3 418 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 RNFT2Q96EX2 444 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CEP19Q96LK0 163 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 KCTD7Q96MP8 289 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 OR5M11Q96RB7 305 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 TEAD3Q99594 435 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CHCHD6Q9BRQ6 235 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 CENPOQ9BU64 300 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 C6orf62Q9GZU0 229 aaPredicted RBP4.67□□□□□ -1.66
USP3-215ENST00000559771 OR51E2Q9H255 320 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 OR51V1Q9H2C8 321 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 RANBP3Q9H6Z4 567 aaPredicted RBP4.67□□□□□ -1.66
USP3-215ENST00000559771 HES4Q9HCC6 221 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 COPS3Q9UNS2 423 aa4.67□□□□□ -1.66
USP3-215ENST00000559771 SF3B6Q9Y3B4 125 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms