RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 SERPINE3A8MV23 424 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A12PA8MX19 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A5PA8MXJ8 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 C3orf84H3BNL1 204 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 SNRNP70P08621 437 aaKnown RBP12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A15PP0C7V4 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A13PP0C7W8 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A14PP0C7W9 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAM90A24PP0C7X0 464 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 CALB2P22676 271 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 MTCP1P56278 107 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 C5orf56Q8N8D9 126 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 DUX3Q96PT4 197 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 LINC00527Q9UJ94 153 aa12.83□□□□□ -0.36
CDC42BPB-205ENST00000559245 SORL1Q92673 2214 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 IGKV1-9A0A0C4DH69 117 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 LOC107986453A0A1B0GWG9 222 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 METTL15A6NJ78 407 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 HOXB6P17509 224 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 DAPP51397 102 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 GP2P55259 537 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 SLC35B1P78383 322 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 EFNB1P98172 346 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 ZNF695Q8IW36 515 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 PRSS35Q8N3Z0 413 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 OR56B4Q8NH76 319 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 TMEM163Q8TC26 289 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 TOMM40LQ969M1 308 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 RPEQ96AT9 228 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 ADAT3Q96EY9 351 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 COQ2Q96H96 371 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 RAX2Q96IS3 184 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 COMMD4Q9H0A8 199 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 PCDHB16Q9NRJ7 776 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 ING3Q9NXR8 418 aa12.82□□□□□ -0.36
CDC42BPB-205ENST00000559245 A0A1W2PQL4 384 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 ZNF729A6NN14 1252 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 ZFPL1O95159 310 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 CSN2P05814 226 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 ZNF44P15621 663 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 TMEM11P17152 192 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 ATF1P18846 271 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 NFYBP25208 207 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 RAB25P57735 213 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 SCN1BQ07699 218 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 PDZK1IP1Q13113 114 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 HES1Q14469 280 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 ZSCAN26Q16670 478 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 KRBOX4Q5JUW0 171 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 FAHD1Q6P587 224 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 GID4Q8IVV7 300 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 RDH10Q8IZV5 341 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 COMMD1Q8N668 190 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 DRAM1Q8N682 238 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 OR9G1Q8NH87 305 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 RFT1Q96AA3 541 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 NRBF2Q96F24 287 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 IL4I1Q96RQ9 567 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 PRR25Q96S07 402 aa12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 AMMECR1Q9Y4X0 333 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPB-205ENST00000559245 IGKV1-12A0A0C4DH73 117 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 CCL24O00175 119 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 FGF16O43320 207 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 FKBP6O75344 327 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 SULT1C4O75897 302 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 ATP5HO75947 161 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 IGKV1D-12P01611 117 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 IGHG2P01859 326 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 UBCP0CG48 685 aaKnown RBP12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 PRKACBP22694 351 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 LUMP51884 338 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 UTS2BQ765I0 119 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 SLC35E3Q7Z769 313 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 SLC7A6OSQ96CW6 309 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 KIRREL1Q96J84 757 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 ASCL2Q99929 193 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 THTPAQ9BU02 230 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 HUWE1Q7Z6Z7 4374 aaKnown RBP12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 TENM2Q9NT68 2774 aa12.8□□□□□ -0.36
CDC42BPB-205ENST00000559245 A0A1W2PPI3 338 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 J3QR06 171 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 SLC33A1O00400 549 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 KDM4BO94953 1096 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 APOL3O95236 402 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 OR2T7P0C7T2 308 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 EPHA2P29317 976 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 HNF4GQ14541 408 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 ATXN7L3Q14CW9 347 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 KLHL22Q53GT1 634 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 C9orf66Q5T8R8 295 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 C12orf73Q69YU5 71 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 Q6P435 159 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 SPATA24Q86W54 205 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 FOXRED2Q8IWF2 684 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 STPG2Q8N412 459 aa12.79□□□□□ -0.36
CDC42BPB-205ENST00000559245 OPALINQ96PE5 141 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms