RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 DOCK3Q8IZD9 2030 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 SCN10AQ9Y5Y9 1956 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 PLXNA3P51805 1871 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 SPTY2D1-AS1A0A0U1RR47 76 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 PQLC2LA1A4F0 135 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 FCN1O00602 326 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 RHBDL1O75783 438 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 CRYABP02511 175 aaKnown RBP6.27□□□□□ -1.41
USP3-210ENST00000559192 PMP22Q01453 160 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 NAAAQ02083 359 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 YRDCQ86U90 279 aaKnown RBP6.27□□□□□ -1.41
USP3-210ENST00000559192 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 OR2C3Q8N628 320 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 SLC26A10Q8NG04 563 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 APH1AQ96BI3 265 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 C5orf66Q9H5L9 145 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 CALHM2Q9HA72 323 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 OR5H1A6NKK0 313 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 MRPL33O75394 65 aaKnown RBP6.27□□□□□ -1.41
USP3-210ENST00000559192 CTSDP07339 412 aaPredicted RBP6.27□□□□□ -1.41
USP3-210ENST00000559192 EIF1P41567 113 aaKnown RBP6.27□□□□□ -1.41
USP3-210ENST00000559192 COMPP49747 757 aaPredicted RBP6.27□□□□□ -1.41
USP3-210ENST00000559192 ACER2Q5QJU3 275 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 TGIF2LXQ8IUE1 241 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 ADAMTS17Q8TE56 1095 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 MRGPRX4Q96LA9 322 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 TMEM191AQ9H0A3 160 aa6.27□□□□□ -1.41
USP3-210ENST00000559192 DHRS3O75911 302 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 LYPD3O95274 346 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 FSTP19883 344 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 SSR4P51571 173 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 TGFBR3Q03167 851 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 FUT7Q11130 342 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 OR5AS1Q8N127 324 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 OR1L3Q8NH93 324 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 UBALD1Q8TB05 177 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 GPBAR1Q8TDU6 330 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 SLC39A7Q92504 469 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 GPX7Q96SL4 187 aaPredicted RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 NOSIPQ9Y314 301 aaKnown RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 A0A096LPE4 126 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 TGIF2-C20orf24A0A0A6YYL0 155 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 A0A1W2PPZ6 126 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 SPINK4O60575 86 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 EIF1BO60739 113 aaKnown RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 FOLR3P41439 243 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 EWSR1Q01844 656 aaKnown RBP eCLIP6.26□□□□□ -1.41
USP3-210ENST00000559192 IL13RA2Q14627 380 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 HIST3H3Q16695 136 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 OR10G3Q8NGC4 313 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 OR4A4PQ8NGN8 299 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 CHRDL1Q9BU40 450 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 OPN3Q9H1Y3 402 aaPredicted RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 FOXS1O43638 330 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 GYPAP02724 150 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 CD74P04233 296 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 FBP1P09467 338 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 GLB1P16278 677 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 GABRG2P18507 467 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 P2RY1P47900 373 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 P2RY4P51582 365 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 ERVFRD-1P60508 538 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 HLA-DRB3P79483 266 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 TMEM92Q6UXU6 159 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 CARFQ8N187 725 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 TBX15Q96SF7 602 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 ATP5SQ99766 215 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 MCTS1Q9ULC4 181 aaKnown RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 YBX2Q9Y2T7 364 aaKnown RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 SOX21Q9Y651 276 aaPredicted RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 MYOFQ9NZM1 2061 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 A0A1W2PR80 420 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 SIRPB1O00241 398 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 BCAT2O15382 392 aaPredicted RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 ABHD16AO95870 558 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 EGR4Q05215 589 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 GABRA6Q16445 453 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 MPV17LQ2QL34 196 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 DEGS2Q6QHC5 323 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 C9orf40Q8IXQ3 194 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 VN1R17PQ8TDU5 208 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 RNF133Q8WVZ7 376 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 IP6K3Q96PC2 410 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 ANXA10Q9UJ72 324 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 GPR132Q9UNW8 380 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 CASP8AP2Q9UKL3 1982 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 ST8SIA5O15466 376 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 WDR1O75083 606 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 PATE4P0C8F1 98 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 CRISP2P16562 243 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 COX5AP20674 150 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 AESQ08117 197 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 ATP6V1FQ16864 119 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 NKAIN1Q4KMZ8 207 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 OR5AU1Q8NGC0 362 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 OR11L1Q8NGX0 322 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 FAM131CQ96AQ9 280 aa6.26□□□□□ -1.41
USP3-210ENST00000559192 ALKBH3Q96Q83 286 aaPredicted RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 ZNF256Q9Y2P7 627 aaPredicted RBP6.26□□□□□ -1.41
USP3-210ENST00000559192 CARHSP1Q9Y2V2 147 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms