RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 SCN1BQ07699 218 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 BNIP1Q12981 228 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 IL24Q13007 206 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 UBE2V2Q15819 145 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 GRK1Q15835 563 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 NSUN5P1Q3KNT7 163 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 ZIK1Q3SY52 487 aaPredicted RBP5.92□□□□□ -1.46
SPG11-213ENST00000558988 TMEM42Q69YG0 159 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 DYNAPQ8N1N2 210 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 OR5D18Q8NGL1 313 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 NDNFQ8TB73 568 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 PYDC1Q8WXC3 89 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 ST8SIA2Q92186 375 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 EME1Q96AY2 570 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 SPACA5Q96QH8 159 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 GABARAPL1Q9H0R8 117 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 C16orf95Q9H693 158 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 RBFOX1Q9NWB1 397 aaKnown RBP5.92□□□□□ -1.46
SPG11-213ENST00000558988 MTCH1Q9NZJ7 389 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 AASSQ9UDR5 926 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 K7N7A8 449 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 F2RL2O00254 374 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ENTPD6O75354 484 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 HAND1O96004 215 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 CYB5AP00167 134 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 CHRM2P08172 466 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ZNF728P0DKX0 622 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 BCL3P20749 454 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 MPZP25189 248 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 FUT6P51993 359 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 EFNB2P52799 333 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ATP1B3P54709 279 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 OR12D2P58182 307 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ACTA2P62736 377 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ACTG2P63267 376 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ACTC1P68032 377 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ACTA1P68133 377 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ZNF85Q03923 595 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 SLC34A1Q06495 639 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 HERPUD1Q15011 391 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 CNN3Q15417 329 aaKnown RBP5.91□□□□□ -1.46
SPG11-213ENST00000558988 TMEM95Q3KNT9 176 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 LPCAT4Q643R3 524 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 OR8H2Q8N162 312 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 PRSS35Q8N3Z0 413 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 C11orf42Q8N5U0 333 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ZNF676Q8N7Q3 588 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 OR8J1Q8NGP2 316 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 OR13C9Q8NGT0 318 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 OR13D1Q8NGV5 346 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 RFKQ969G6 155 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 FGGYQ96C11 551 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ADAT3Q96EY9 351 aaPredicted RBP5.91□□□□□ -1.46
SPG11-213ENST00000558988 CENPNQ96H22 339 aaPredicted RBP5.91□□□□□ -1.46
SPG11-213ENST00000558988 ZNF714Q96N38 554 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 GABARAPL3Q9BY60 117 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 PKIBQ9C010 78 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 CHST5Q9GZS9 411 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 HES4Q9HCC6 221 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 RAB18Q9NP72 206 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 GSTK1Q9Y2Q3 226 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 ORC6Q9Y5N6 252 aa5.91□□□□□ -1.46
SPG11-213ENST00000558988 hADV38S2A0JD32 116 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 DHRS7CA6NNS2 312 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 G3V4G9 280 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 J3QLW9 94 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 HSPB6O14558 160 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 EI24O14681 340 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 NOS1APO75052 506 aaPredicted RBP5.9□□□□□ -1.46
SPG11-213ENST00000558988 ZNF737O75373 536 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 SULT1C4O75897 302 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 HTR1AP08908 422 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 UBCP0CG48 685 aaKnown RBP5.9□□□□□ -1.46
SPG11-213ENST00000558988 IGHV1-8P0DP01 117 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 CD28P10747 220 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 ZNF44P15621 663 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 ZNF19P17023 458 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 CCL1P22362 96 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 CD24P25063 80 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 AZGP1P25311 298 aaKnown RBP5.9□□□□□ -1.46
SPG11-213ENST00000558988 PEX2P28328 305 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 NPBWR2P48146 333 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 RBP2P50120 134 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 DLX6P56179 175 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 ERVK11-1P61568 191 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 EFNB1P98172 346 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 RBM39Q14498 530 aaKnown RBP5.9□□□□□ -1.46
SPG11-213ENST00000558988 PRAMEF5Q5TYX0 476 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 CCBE1Q6UXH8 406 aaPredicted RBP5.9□□□□□ -1.46
SPG11-213ENST00000558988 BAIAP2L2Q6UXY1 529 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 KRT74Q7RTS7 529 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 FAM58AQ8N1B3 248 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 OR4S1Q8NGB4 309 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 OR52N4Q8NGI2 321 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 OR13C3Q8NGS6 347 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 OR2G2Q8NGZ5 317 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 OR10AC1Q8NH08 325 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 RPS4Y2Q8TD47 263 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 ITFG2Q969R8 447 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 RNFT2Q96EX2 444 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms