RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CARTPTQ16568 116 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 PNLIPRP3Q17RR3 467 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 PYDC2Q56P42 97 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 PAN3Q58A45 887 aaKnown RBP15.09■□□□□ 0.01
CLPX-203ENST00000558958 HACD4Q5VWC8 232 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 GCDHQ92947 438 aaPredicted RBP15.09■□□□□ 0.01
CLPX-203ENST00000558958 PERPQ96FX8 193 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 GAFA1Q96PS6 74 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 CCL13Q99616 98 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 TMEM246Q9BRR3 403 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 MAB21L2Q9Y586 359 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 ARID1AO14497 2285 aa15.09■□□□□ 0.01
CLPX-203ENST00000558958 TMEM82A0PJX8 343 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 HSPB6O14558 160 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 NDUFA2O43678 99 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 DNASE1P24855 282 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 GIFP27352 417 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 CD40LGP29965 261 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 PPP5CP53041 499 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 AVPI1Q5T686 147 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 C17orf107Q6ZR85 190 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 BPIFB2Q8N4F0 458 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 ZNF561Q8N587 486 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 GDPD1Q8N9F7 314 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 SDHCQ99643 169 aaPredicted RBP15.08■□□□□ 0.01
CLPX-203ENST00000558958 ZNF665Q9H7R5 613 aa15.08■□□□□ 0.01
CLPX-203ENST00000558958 BEX4Q9NWD9 120 aaPredicted RBP15.08■□□□□ 0.01
CLPX-203ENST00000558958 UBE2QL1A1L167 161 aa15.08■□□□□ 0
CLPX-203ENST00000558958 MEIOCA2RUB1 952 aa15.08■□□□□ 0
CLPX-203ENST00000558958 NKX6-3A6NJ46 265 aa15.08■□□□□ 0
CLPX-203ENST00000558958 SIGLEC5O15389 551 aa15.08■□□□□ 0
CLPX-203ENST00000558958 CA11O75493 328 aa15.08■□□□□ 0
CLPX-203ENST00000558958 PRSS3P35030 304 aa15.08■□□□□ 0
CLPX-203ENST00000558958 GPR6P46095 362 aaPredicted RBP15.08■□□□□ 0
CLPX-203ENST00000558958 PDLIM4P50479 330 aa15.08■□□□□ 0
CLPX-203ENST00000558958 MRPS10P82664 201 aaKnown RBP15.08■□□□□ 0
CLPX-203ENST00000558958 RBM39Q14498 530 aaKnown RBP15.08■□□□□ 0
CLPX-203ENST00000558958 SHEQ5VZ18 495 aa15.08■□□□□ 0
CLPX-203ENST00000558958 DCDC5Q6ZRR9 648 aa15.08■□□□□ 0
CLPX-203ENST00000558958 DNM1P46Q6ZS02 220 aa15.08■□□□□ 0
CLPX-203ENST00000558958 MUC20Q8N307 709 aaPredicted RBP15.08■□□□□ 0
CLPX-203ENST00000558958 ASCC1Q8N9N2 400 aaKnown RBP15.08■□□□□ 0
CLPX-203ENST00000558958 ZNRF1Q8ND25 227 aa15.08■□□□□ 0
CLPX-203ENST00000558958 SNX22Q96L94 193 aa15.08■□□□□ 0
CLPX-203ENST00000558958 SHARPINQ9H0F6 387 aa15.08■□□□□ 0
CLPX-203ENST00000558958 PPA2Q9H2U2 334 aa15.08■□□□□ 0
CLPX-203ENST00000558958 KAAG1Q9UBP8 84 aa15.08■□□□□ 0
CLPX-203ENST00000558958 AK3Q9UIJ7 227 aa15.08■□□□□ 0
CLPX-203ENST00000558958 A0A1B0GW55 424 aa15.07■□□□□ 0
CLPX-203ENST00000558958 ISPDA4D126 451 aa15.07■□□□□ 0
CLPX-203ENST00000558958 GABARAPH6UMI1 98 aa15.07■□□□□ 0
CLPX-203ENST00000558958 J3QRK9 145 aa15.07■□□□□ 0
CLPX-203ENST00000558958 K7N7A8 449 aa15.07■□□□□ 0
CLPX-203ENST00000558958 TMPRSS2O15393 492 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DUX4L2P0CJ85 424 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DUX4L3P0CJ86 424 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DUX4L4P0CJ87 422 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DUX4L5P0CJ88 424 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DUX4L6P0CJ89 424 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DUX4L7P0CJ90 424 aa15.07■□□□□ 0
CLPX-203ENST00000558958 OR3A1P47881 315 aa15.07■□□□□ 0
CLPX-203ENST00000558958 GNG2P59768 71 aa15.07■□□□□ 0
CLPX-203ENST00000558958 IL13RA1P78552 427 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DGCR2P98153 550 aa15.07■□□□□ 0
CLPX-203ENST00000558958 GUCA2AQ02747 115 aa15.07■□□□□ 0
CLPX-203ENST00000558958 TMEM155Q4W5P6 130 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DUX4L9Q6RFH8 374 aaPredicted RBP15.07■□□□□ 0
CLPX-203ENST00000558958 LYPD2Q6UXB3 125 aa15.07■□□□□ 0
CLPX-203ENST00000558958 Q8N402 240 aa15.07■□□□□ 0
CLPX-203ENST00000558958 FAM216BQ8N7L0 139 aa15.07■□□□□ 0
CLPX-203ENST00000558958 OR4S1Q8NGB4 309 aa15.07■□□□□ 0
CLPX-203ENST00000558958 NEK7Q8TDX7 302 aa15.07■□□□□ 0
CLPX-203ENST00000558958 SMIM4Q8WVI0 70 aa15.07■□□□□ 0
CLPX-203ENST00000558958 NUDCD2Q8WVJ2 157 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DYRK2Q92630 601 aa15.07■□□□□ 0
CLPX-203ENST00000558958 MBD6Q96DN6 1003 aa15.07■□□□□ 0
CLPX-203ENST00000558958 MED30Q96HR3 178 aa15.07■□□□□ 0
CLPX-203ENST00000558958 CHST6Q9GZX3 395 aa15.07■□□□□ 0
CLPX-203ENST00000558958 SCPEP1Q9HB40 452 aa15.07■□□□□ 0
CLPX-203ENST00000558958 DUX4Q9UBX2 424 aa15.07■□□□□ 0
CLPX-203ENST00000558958 NAV2Q8IVL1 2488 aa15.06■□□□□ 0
CLPX-203ENST00000558958 SULT1C2O00338 296 aa15.06■□□□□ 0
CLPX-203ENST00000558958 ADAM20O43506 726 aa15.06■□□□□ 0
CLPX-203ENST00000558958 GSTZ1O43708 216 aaPredicted RBP15.06■□□□□ 0
CLPX-203ENST00000558958 SSX5O60225 188 aa15.06■□□□□ 0
CLPX-203ENST00000558958 CSF3P09919 207 aa15.06■□□□□ 0
CLPX-203ENST00000558958 SELLP14151 372 aa15.06■□□□□ 0
CLPX-203ENST00000558958 KCNJ3P48549 501 aa15.06■□□□□ 0
CLPX-203ENST00000558958 ARFRP1Q13795 201 aa15.06■□□□□ 0
CLPX-203ENST00000558958 DEFB113Q30KQ7 82 aa15.06■□□□□ 0
CLPX-203ENST00000558958 SLC36A1Q7Z2H8 476 aa15.06■□□□□ 0
CLPX-203ENST00000558958 OR52I2Q8NH67 350 aa15.06■□□□□ 0
CLPX-203ENST00000558958 PPP1R35Q8TAP8 253 aa15.06■□□□□ 0
CLPX-203ENST00000558958 GPX8Q8TED1 209 aa15.06■□□□□ 0
CLPX-203ENST00000558958 NINJ1Q92982 152 aa15.06■□□□□ 0
CLPX-203ENST00000558958 LURAP1Q96LR2 239 aa15.06■□□□□ 0
CLPX-203ENST00000558958 ETAA1Q9NY74 926 aa15.06■□□□□ 0
CLPX-203ENST00000558958 ANKRD17O75179 2603 aaKnown RBP15.05■□□□□ 0
CLPX-203ENST00000558958 CEACAM18A8MTB9 384 aa15.05■□□□□ -0
CLPX-203ENST00000558958 TK1P04183 234 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms